Ruditapes philippinarum (Manila clam): 132736221
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Entry
132736221 CDS
T09557
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1-like
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
132736221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rphi03009
]
132736221
Enzymes [BR:
rphi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
132736221
Ribosome biogenesis [BR:
rphi03009
]
Eukaryotic type
90S particles
Other 90S particles
132736221
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
132736221
NCBI-ProteinID:
XP_060579305
LinkDB
All DBs
Position
Unknown
AA seq
151 aa
AA seq
DB search
MLLDSPLNRAGLLQVYIHTEKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSIHAADGPQ
KLLKVIKNPVTDHLPIGCKKIGMSFKAEKCVDPRTLVPSDDPVVFVVGAMAHGSIDTDYT
EEEYSISNYPLSAALTCAKLCNAFEEKWDIM
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atgttactggacagccctttaaacagagctggtttgttacaagtttatattcacacagag
aaaaatgtcctcatagaggtcaaccctcagacaagaataccaagaacttttgacagattt
tgtggtctgatggttcagttattacacaagctcagtatacatgcagctgatggtcctcaa
aaattgttaaaggttataaagaacccagtgacagatcatttacctataggatgtaagaag
attggtatgtcatttaaagcggagaaatgtgttgatccacggacgttagttccttctgat
gatcctgtagtgtttgtggtaggggccatggctcatggcagtattgatacagactataca
gaagaggaatactctatcagtaattatccactctctgctgctttaacttgtgcaaaactg
tgtaatgcctttgaagaaaaatgggacatcatgtga
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integrated database retrieval system
