Ruditapes philippinarum (Manila clam): 132736332
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Entry
132736332 CDS
T09557
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8-like
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04137
Mitophagy - animal
rphi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132736332
04137 Mitophagy - animal
132736332
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rphi01002
]
132736332
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132736332
04121 Ubiquitin system [BR:
rphi04121
]
132736332
Enzymes [BR:
rphi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
132736332
Peptidases and inhibitors [BR:
rphi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
132736332
Membrane trafficking [BR:
rphi04131
]
Endosome - Lysosome transport
Others
Others
132736332
Ubiquitin system [BR:
rphi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
132736332
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
USP8_dimer
UCH_1
WW
Rhodanese
Motif
Other DBs
NCBI-GeneID:
132736332
NCBI-ProteinID:
XP_060579425
LinkDB
All DBs
Position
Unknown
AA seq
1206 aa
AA seq
DB search
MPGSKKKDLYIAKSIGKLNEMAELPAKFKNTNAKLLVKTADKMLKEAEHSEMMEDEERAY
VLFMKYFNVVTFLKRSADYKKQKAYYDDLLGAKNLLTSISKAEELSSSLKKRYDELEAKN
VASKLASLDTIEQKTESKDEKKAEDSADKSDKKLEPTEKQPEEAAKTSPGVVTCNQLFDL
FEDRDAQLILMDVRSMEDFQETRINHKNIINVPAEAIKPGTTVTYIEKALPMDSLSLWKQ
RGNIDHIILLDWNSGIDQVKIGSSLQTLKDALFKYDSTVIIKSEPLILDGGYEQWMLQYP
TKCVNPVFDKLKKPVVSSTQDSLMDFDYPDFDETFMEPKQAGTSSNDSSASSSSLNSVNS
LTNGDVTSQFPKIDRSTKPKIDRSTKVNVAKTGISSNKPVTGSLYPDVGAVSKSGSSLYS
KTTEAGSHIINSSFKNAEYRADSASSQDIKNSSSLNLAAQSTEISDELTALNLQRKQKME
ELQKLQENYEKMEAESRARMERMKNEEKKLSDLEELKRKQQSDVADLMRLKKNLHSEMAE
EKQRVQYQQIEKEQEETHRKKELEQLSRAEEEKRKRREEVDRLRMDRKKKEEERLESERR
IKDEQDLKNARERAQEEEEQRRKDFVAAEERIKQMKAEDQRKAREKIELEERLQRERELA
AKLEKDRLAALEEKRRQQAELDRLETERREKLRQDKERTEKERLEREKRERDEEDRKKAA
EAKRIADEKIRLMNEAKTKPKPVPSPNLQKGWEKQLDPSTNRYFYINHNEGTTQWDPPGE
GKGGTYTTRLKDEPSTPKSGGLKRSNSSPNIAQMMEDEAKLPQRKLTPSVDRGNKPVKRP
MPVALPAKRRDLNPVYGNVGPALTGLRNLGNTCYMNSTIQCLNNTSPLVTYLLTDMFLYD
INRGGKSGNLWEVTDDFAYLVKSLWSGQYRFITPRDFKSVVGKHQPMFAGYEQQDSQEFL
TFLLDSLHEGLNKVKTRPKIADQDNDKLPDHIGAEIAWNNHKLHNESIIVELFQGQLKST
IMCLTCRKKSVTFQAFMFLSLPIPSSGKCTLQDCLRQFAAEEKMTGSSRWKCPQCKCYRD
SVKNIVIWKLPHILLIALNRFVYEGQWRTKINAHVDFPVKGLDMSSFVMGPRPKPYKLYA
VSNHFGTLDGGHYTACCRNPTTQKWYKFDDHEVYDTSESSVKTSAAYVLYYTSIDLLPPE
FKPNFS
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgccaggctcaaaaaagaaggatttatatatagcaaagagtattgggaaactcaatgag
atggccgagctgccagcaaagttcaagaacacgaatgcaaaacttttggtgaagacggca
gacaagatgttgaaggaggctgagcacagtgagatgatggaagacgaggaacgtgcctac
gtcttgttcatgaaatatttcaacgtcgtaactttcctgaaaagatctgctgactacaag
aaacaaaaggcatactatgatgatttgttaggcgcaaaaaatcttctcacatctataagc
aaggctgaggaactgtcgtccagtcttaagaagaggtatgatgagttagaagccaaaaat
gttgccagtaaacttgcatccctcgataccatagaacagaaaacagagagcaaagatgag
aaaaaggctgaagatagtgccgataagtcagacaaaaagttggaaccaaccgaaaaacag
cctgaagaggcagcaaagaccagcccaggtgttgtaacatgcaatcagttatttgactta
tttgaggacagagatgctcagcttatactcatggatgtacgttcaatggaagatttccag
gagacgagaattaatcataaaaatataatcaacgtgcctgccgaggccatcaaaccagga
acaactgttacatacatagagaaagctttacccatggattccttgtcgctatggaaacaa
aggggtaacattgatcatatcatattactagactggaactcgggtatagaccaggttaaa
attggatccagtctacagacactgaaggatgccctgttcaagtatgactcgacagtgata
atcaaaagtgagccgctcattctagatggcggatatgagcagtggatgttacagtaccca
acgaaatgtgtgaacccggtctttgataaacttaaaaaacctgtggtgagctcaactcaa
gattctttaatggactttgattatccagattttgatgaaactttcatggaaccaaaacaa
gcagggactagttctaatgattcatcagcttcatcatcgtccttaaacagtgttaattct
ctaactaatggggatgttacttcccaatttccgaaaattgatagatctacaaaaccaaaa
attgatagatctacaaaagtgaatgttgctaaaactggtataagttctaacaaacctgta
actggttctctgtatccagatgtcggagctgtcagtaagtcgggaagcagtttatatagc
aaaacaactgaggctggttcccatattattaattcaagttttaagaatgctgaatacagg
gcggattcggcctctagtcaggatatcaaaaacagttcaagtttaaatttagctgcacaa
tcgacggagatttctgatgaattgacagctctgaatttacagaggaagcagaagatggaa
gaactgcagaaacttcaagaaaactacgagaagatggaagccgagtcgcgtgccaggatg
gagcgaatgaagaatgaagagaagaagttgtcagatctagaggagctgaagaggaaacag
caatctgatgtggccgatctaatgagattgaagaagaatctacatagtgagatggcggaa
gaaaaacagcgagtacagtatcaacaaattgagaaagagcaagaggagactcataggaaa
aaagaattggaacagctatctagagcagaggaagaaaagagaaaaagaagggaagaagtt
gacaggttaaggatggatagaaagaagaaggaagaagagagattggagagtgagagaaga
ataaaagatgaacaagatttaaagaatgctagggagagagcacaagaagaagaagaacaa
cgcaggaaagattttgttgcagcagaagaaagaattaaacaaatgaaggcagaagaccaa
agaaaggcaagggagaaaattgaacttgaagaaagacttcagagggagagggagttggca
gctaagctggagaaagatagactagctgccttagaagaaaagagaaggcaacaggctgag
ctagacaggttggaaacagagcgcagggaaaagttgaggcaggataaagaaagaacagag
aaagaaagattggaaagggagaaaagagaaagggatgaagaagatagaaagaaagctgca
gaggctaaacgtattgctgatgagaagatcaggttaatgaatgaagccaagacaaagcct
aaaccggttccctcaccaaatctacagaaaggctgggagaaacagctggatcccagcaca
aacagatacttctatatcaaccataatgagggaactacacaatgggatcctccaggtgaa
ggtaaaggtggtacatacactacacgactgaaagatgaaccctccacacccaagtcaggc
ggcctcaagaggtcaaactcctcccctaatattgcacagatgatggaagacgaggctaaa
ctccctcaaaggaaactaacaccgtctgttgacaggggaaataaacctgttaaaagacca
atgcctgtagctttacctgcaaaaagaagagatttgaatccagtctatggaaatgtgggt
cctgcattgactggattacgtaaccttggtaacacgtgttatatgaacagcacgatacag
tgtctgaacaatacgtcgccacttgtgacgtaccttcttactgatatgttcctgtatgat
attaacaggggaggcaaatctggaaacttatgggaagtaacagatgattttgcatacttg
gttaagtccctttggtcaggacagtacaggttcataactcctagagattttaagtctgtg
gtagggaagcatcagccaatgtttgctgggtatgaacaacaagatagtcaagaattcctt
acatttcttctggacagtcttcacgagggactcaataaggtaaagacacgtccaaagata
gctgaccaagacaatgacaagttaccagatcacattggtgcagaaattgcttggaataat
cataaactacacaatgaatctattattgtagagctgtttcagggtcagttaaaatcaacc
atcatgtgcctgacatgtaggaagaagagtgttacgttccaagccttcatgtttctgtca
ctaccaatcccgtcatctggtaaatgtacacttcaggattgtctacgtcagtttgcagca
gaagagaaaatgacgggaagttcacgctggaaatgtccacagtgtaaatgttatcgggac
tcggtcaaaaatattgttatttggaaactaccgcacatattgttgattgcgttaaacaga
ttcgtgtacgaaggtcaatggagaacaaaaataaatgctcatgtggattttcctgttaaa
ggtttagacatgtcctcgtttgtgatgggtccgagacctaagccatataagctctatgct
gtgtcgaatcactttgggactctagatggaggccattacaccgcatgttgtagaaatccg
accacacagaaatggtacaagtttgatgaccacgaggtgtatgatacttctgagtccagt
gttaagacgtcagcagcatatgtcctgtattatacatcaatagatttgctaccaccagag
tttaaacctaacttctcttga
DBGET
integrated database retrieval system
