Ruditapes philippinarum (Manila clam): 132736517
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Entry
132736517 CDS
T09557
Name
(RefSeq) C-myc promoter-binding protein-like
KO
K20163
DENN domain-containing protein 4
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132736517
Membrane trafficking [BR:
rphi04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
132736517
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
132736517
NCBI-ProteinID:
XP_060579637
LinkDB
All DBs
Position
Unknown
AA seq
1430 aa
AA seq
DB search
MDGRRVADYFVVAGLPDNPLPLEEFSNEAAIKSTYKQDPITDISVINKSLGERIPRGYQC
LDKTPNEYPADLNHGSIRGSEMYICYRRSRDKPPLTDVGVLYEGKERLMSGCEVIHTTYF
GTPANVNNSNNGRTYITYRRAAENAPSDMLAVVDLCIIIENKGESPPHSYCQISKNLNRG
LVGSDVFLCYKKAMTKIDILAYKPAILDRYPKEDYPEFPLPESVAMFCLPMGASIECWSA
KAQHPYPVFSTFILTGIGWNKVYGAAITFYEEFPEEKLTDLQMRHLGLKNKHIREQYRIM
KTVHSNKSICLLSHWPFFDAFKKLLSYLYRISITGSHIVPIERHISHFMYDVPYPSPQRP
RILVQLSHDSISLSMPEDSPLPQSGASFVTMLRNLGPENCMTILLYVLNEHKILIHSLRP
AVLTSVAEAVSTLIFPLQWQCPYIPLCPLGLSDVLNAPTPYIIGLDSRYFDLFDPPPDVI
CIDLDTIRIWPPDDKKNISYKLLPKKATKVLQESLHKLYDRLNEELPRQGHDDVTLDIAP
IDQDFKRKHKEMMMELQIQESFLRFMACILKGYKNYLKPIENAPDLDTTNAASLFDMTGF
LKSREKANQKFFQTLLRTQLFNRFIEERSFVSDKDDSLAFFDECTEKVDETKDEPKLIEL
DDSSKSERTMFILPPEPVGLPEGKAYNYNGFPNLNPDLFLEKNKPDRSSAKVKGQTIQHS
PVARRTKQEIKTAQKLAQQYITQPPLWAKCLLSHCYSLWFMVLPAFIKKSSSVTKALALA
YEVLKNMQRQKLKPPDELCYRVMLQLCGQYNQPVLAVKVYSEMKHAGVQPNAITYGYYNK
AVLEGKWPSSVSKGRLLWRKVRNVIIGVAKFRKAIRRRSLSAYSNSGSEYDQISRTSFDS
FLEDEKTDVKHESIMKHDSHTGRVEKVMEEIESTESAPPSHPSFMSQIDRLCEAERHSVH
VQFCEPETKEIAIEAEISSCSRCVRCRCLLYDEEIMAGWSADDSNLNTSCQFCNAKMVPH
LLIYIKDHRGKTRTKVSDNDTEDGLIQFDDNPAISHSQMECSYGKDSNICPSTEPQLMFN
DDIDDDSPVKSPASLHDPWMRQSTHIPSEPTDIPSKSVSHDSPNLSDMARLGHRRTGSEC
LTSATEFMFSSSIDSVESLTFRNFRSPLSISIDSESLSGHPSLSPEARRAAKNGVISSME
PVSVPYLSPLVLRKNLESIMESEGNTALTLDTFVDEHPIIFWNLVWYFKRISATSHLPGL
LLTAKSFNSSGVQDNGDHGSDNVVIRPMWDNPRIHQEVGLPMHMAWNKCRSSTTVDALLT
EAQPFNRAVLHQIITNIQCNDVLSPIKMVMNGRRRLRPRRKRFRSLYREILFLAFIACGR
ENIDNDAFDREYKMAFSRLSPGEMKRLQRDDKPRTASVQCCRRVFLELLL
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atggacggtcgtcgggttgctgattactttgtcgtagcagggctaccggacaacccgctg
cctctagaggaattttcaaatgaggctgcgattaagtctacttataagcaagatcctata
acagatatcagtgtgataaacaaatcacttggtgaacgtataccacgtggataccaatgt
ctagacaaaacacctaatgaatatccggcagatttgaaccatggtagtatacgtgggagt
gagatgtacatatgttataggcgtagcagggataagccgcctcttactgatgtcggcgta
ttgtatgagggtaaggaacgattaatgtcgggatgtgaagttatacatacaacatacttc
ggtacaccagcaaacgttaacaacagtaataatgggaggacgtatattacatacagaagg
gcggcagagaatgcccctagtgatatgctagcagtagttgatctctgtattatcatagag
aacaagggtgagagtcctcctcattcatactgccagattagtaagaatctaaacagaggc
ctggttggttctgatgttttcctgtgttacaagaaggcaatgacaaaaattgatatatta
gcctacaagccagctattttggatcgttatccaaaagaagactacccagaatttcctcta
cctgagtcagtagcaatgttttgtttacctatgggtgcctccatagagtgctggtctgcg
aaggctcagcacccttaccctgtcttctctacattcatacttactggaataggatggaat
aaggtatatggagcagctatcacattttatgaggagtttccggaagagaagcttacagat
ttacagatgcgtcaccttggcttgaaaaacaaacatatccgtgaacagtaccgtatcatg
aagactgtacattccaataagagcatatgtctactgtcacattggcctttctttgatgct
tttaaaaaattgctcagctatctatatagaatatctatcactggatctcatattgttcca
atagaaagacatatatcacatttcatgtatgatgttccttatccatctccccaaaggcct
agaattcttgttcagttgagtcatgattcaatatctctgtctatgcctgaagactcgcct
ctcccacaaagtggtgcttcatttgtaacgatgttaagaaatctgggtccagagaactgt
atgacaatattgctgtatgttctaaatgaacacaagattttaatacattcactcagacct
gctgtcctaactagtgttgctgaggcagtctctactttaatattccctctacagtggcag
tgtccgtacattcctttatgtcctctcggtctatcagatgttcttaatgctcctacacca
tatatcataggtttagactcgagatattttgacttgtttgatcccccaccagatgtgata
tgtatagatctagatacaatcaggatctggccgccagatgacaaaaagaatatctcatac
aaactgctgccaaagaaagctacgaaagtgttgcaggagtcacttcataaactgtatgat
agactgaatgaagaattacctcgacaaggtcatgatgatgtcacccttgatattgctccc
attgatcaagattttaaaagaaaacataaagaaatgatgatggagttacagatacaggag
tcattcctgaggtttatggcttgtatattgaaaggttataaaaactacctcaagcccata
gagaatgcaccagatcttgacacaacaaatgctgcttccctctttgacatgacagggttt
ttaaagagtagggagaaagcaaaccaaaagtttttccagacattattgaggacacaacta
tttaacagatttatagaggagagatcatttgtctcggacaaagatgacagtctagctttc
tttgatgagtgtacagaaaaggttgacgaaacaaaagatgaacccaaattaatcgaattg
gatgattcttctaaaagtgaaagaacaatgttcattttacctccagagcctgtaggcttg
ccagaagggaaagcatacaactataatggatttcccaacttgaaccctgaccttttcttg
gagaagaataaacctgacagatcatcagcaaaggttaaaggtcagacaatacagcacagt
ccagttgctaggagaacaaaacaggagattaagacagctcagaaacttgcccagcaatat
atcacacagcctccactatgggcaaaatgtcttcttagtcactgttacagtttatggttt
atggtactgcccgcatttatcaagaaaagttcatctgttaccaaagcactagcattggcc
tatgaggtcttgaaaaatatgcagagacagaagttaaaacccccagacgagttgtgttat
cgggtgatgttacagttatgtggtcagtataaccaacctgtcctggctgttaaagtttac
tctgagatgaaacatgctggtgttcaaccaaatgccattacctatggttattacaataag
gctgtactagaaggtaaatggccgtcaagtgtcagtaaagggagactactgtggagaaaa
gtgagaaatgtaatcattggtgtagccaagttcaggaaggctatacgacgacgaagttta
tctgcatattctaactctggaagcgagtacgatcaaattagtcgaacaagttttgacagt
ttccttgaggatgagaaaactgatgttaaacatgagtctatcatgaagcatgatagtcat
acaggacgggtggagaaagttatggaggagatagaaagtacagagagcgctcctccaagt
catccgtcgtttatgtctcagatagaccgtctttgtgaggccgagcgccacagtgtgcac
gtgcaattctgtgaaccggagacaaaggaaattgctatagaagcggagataagcagttgt
tcccgatgtgtacgttgtaggtgcctgttgtatgatgaagagatcatggcaggttggagt
gctgatgattctaatttaaatacaagttgccagttctgtaatgcaaagatggttccccat
ttactcatttatattaaggaccatcgcggaaagacaagaacaaaagtgtcagataatgat
acagaggatggtcttatacagtttgatgacaatcctgccatctctcattcacaaatggag
tgctcgtacggaaaagacagtaatatttgtccatccaccgagccacagttaatgtttaat
gatgatatagatgatgacagtccagtgaagagtcctgcatcacttcatgacccttggatg
cgccagtccacacacattccatcagaaccaactgatattccatctaaatcagtgtcacat
gattcaccaaatctgtcagatatggcacggttaggtcatagacgtacaggaagtgagtgt
ctcacaagcgcaacagagttcatgtttagttcctcaatagactctgtggagagtttaaca
ttccgtaacttcagatctccgctcagtatttctatagattctgagtcactgtcggggcat
ccttcactttcaccagaggccagaagagctgctaagaatggtgtgatatcttcaatggag
cctgtttctgtaccatatttgagtcccctcgtgttgaggaagaatctggaaagtatcatg
gagagcgagggaaatactgccctcaccttggacacctttgttgatgaacaccctatcatc
ttttggaatctggtatggtacttcaaaagaatatcagcaacaagtcatttaccgggcctc
ttgttgacagcaaaatcgttcaactcatctggagtgcaggacaatggtgaccacggtagt
gataacgtggtgatacgaccaatgtgggacaacccacgtatacaccaggaggtcggactt
cccatgcatatggcatggaataaatgtcgaagttcaacaacagtggatgctttgctgaca
gaagctcaaccattcaacagagcggttttgcatcagatcataacaaacatacagtgtaat
gatgttctaagtcctataaaaatggtgatgaatggtagacgaagattacgaccaagacga
aaacgattccgcagtctatacagggaaatactgtttcttgcattcatagcctgtggaagg
gaaaacatagacaatgatgcctttgatagagaatataagatggcattttcacgtttatca
ccgggagaaatgaaaagattgcaacgggatgataaaccaaggactgcttcagtccagtgt
tgtagaagagttttcctagagctcttgttatga
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