Ruditapes philippinarum (Manila clam): 132736625
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Entry
132736625 CDS
T09557
Name
(RefSeq) LOW QUALITY PROTEIN: neural-cadherin-like
KO
K27892
neural-cadherin
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rphi04515
]
132736625
Cell adhesion molecules [BR:
rphi04515
]
Cadherins
Cadherin related
132736625
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Ig_Shg
CADH_Y-type_LIR
Cadherin_CELSR2_9th
EGF
Fibulin_C
3keto-disac_hyd
BldD-like_C
Motif
Other DBs
NCBI-GeneID:
132736625
NCBI-ProteinID:
XP_060579771
LinkDB
All DBs
Position
Unknown
AA seq
2547 aa
AA seq
DB search
MVSGPGQFSNGVEFTLVVSAQDMAAGTSPSQKSDFAVVKVLVGLRPPQLFENPFRAKVYE
RSGPGSKILDMDNNFLRIRLKLFQDSVHNKTTFNLTKANGKLSGLFSITSTGYVETLQDL
DYEELPNQYTLNVTATEEETGLSSTSQLIIDVADVNDNSPKFQLSTYTFMLSENTPVGGP
ALPLQVMATDRDSGINRELQYFVSDNHFSIQTKFINNQYVGQITVAQKLDFDFRTDHQYK
FNVTARDKGGIPRSGMASVIVYVTNVNDEAPVFGIGSEHLLTKISEEQTAGSVVTIIQAT
DADGDNIKYYFTPMNTQSPPFRIDPDSGLITLTRGLPESIPFYTLNITAYDDGSCCGEAK
SLSSNTFIIVEIKDTNNNQPQFPSCNYAPTVLENQDIGTFVVQVTAIDNDRGNNGNITYS
IVTSPRQPKQFEVDPLNGRVVTAVRFDREALTGARSIPVTVKAADQGEPQSLDSHCTFWV
QIGDINDNSPTFDSPSYATSVSESSSASVKQGRRIFAVRATDRDEGENANIIYTLTDNPG
DFFSVEPDTGIIYLDKGLYGRDSVILRVKAEDQGDPPLSAYSSVTISITDRTNNPPTWNN
DNYEREYRVKETATIPYIIAVMEASSNTEAPFDGLSFALIDSMENTVQQLGPFRIYQEGN
TVTLILKGQLDYNVQNRYELRLRVTNQGQTPLSAEIRPIIVVKDMNNEPPQFEGLDPTLS
NSYRGSVPENEPPGKTVLQIKAVDPDHDPPNNEVSYSLMEDPNDAYMHFNIDKFTGIITT
RSQFDREEQSVYYIKIKAVDGVNSDAPGHFPENTPNSATAQVQVMIADKNDNPPYFIKER
WEISVPEQRADSNGRILTVVAKDLDEADQLSYTITEGNVNNVFGIKQKTGDIYVAKTLDY
ETPPTSYQLRVMVQDGRFENFTEVLIDVTDVNDNPPEFSQNVYEINNVVEETIPPYPDGQ
FLVQVSATDKDVSRQSNFRFFITGDGTEPADPVFTIEPDTGKIFLRKKLDRDQPHGRDVY
QFNVRAEDEPDTPASLSGYAYVKVLPLDINDNAPVFREGDLKGSVQEHSKADQSVMTVVA
TDHDAGLNGTVIYEIDRFGNPPADPNGEHLFKINPATGLIQTSLADSLDRENIAQYFVPI
VAKDRGVEQKRTSATATITILDINDQIPQFVQKIYKVSMSENQKSGPVVTVSATDKDIDE
NARLSYTLKESDRAYFSVEDIPPNAGVLTVYNEVDYETIKFFNLTVIVKDNEPTGLHKDT
AYIEVTIEDYNDNAPEFTPKVKTIRHKENIPEGTLLWTCTATDKDDTINAEFEYSIDRSK
DPDRRFTVDQNGEVRVQRGFDGETLDREALAGLTEERYEVHILAIDKGYPPKTGTAILRI
IVDDLNDNAPQFVLPYPPMVMELEPPPKFVITFRAEDKDTARFGAPFFFALPSCEENPTC
KNGDLEFTMEFDPAGDNGRGTGTVTAQKTFFRDKQKFHYLPIIMSDMRGKNDPQSRTATN
TMTIEIGDENNHPHGPGHKDIFVYKYDFKGDSNSTGVDEDIIIGNVYSADLDDWDVVDKN
YVFFGPPAMSKYFSINKNNGLIKMNKQTPAGKHEFKAKVHDFRVFTKINATATVSVIVEE
ITDEAIFSSGSIRFSGMTAEEFVTRPYNGKSPYDKFRTVLADKLNVPLNNVAIFSVMNVE
DNLVDIRYAAHGSPYYPPSKLDSFVSLDKQEFEDAAGIKITMVNIDMCLRETCESGGCSN
KLVIGDFPNLVNANGTSFIGVATSVVAECQCAATDFSSPPDCTPGYCLNGGQCIKDNWGD
VRCVDCPDGFDGARCQMTRHSFSRGYALYAPFAQCEDSLTSIEFLSKEPDGLIFYNGPVE
ELSRDDPQDFIALSLIDGYPVLQVDHGSGSVTLTLDGRDLNGDRHLQKLNDGRWHHVDIV
RKGKEVTMIVDRCDMLVIDQGSGRVTDRSPCSVSMKTPGENLFLNTNTMLQLGGRYVQPT
IPTSITDIRFVGCMRNLIHNGELYDLYTGQYSKGENHVNGCPDEDNVCGINSIDGPRCGE
HGTCEVTDMVNEQYKCTCHTGYRSSGPGANDCGTETTVRDLKMNSFMSWSLKFDFVNTEI
NPRTTEVQLKFRTRDPDGLLLHLPSNNEEFITLELVGGHVQVLYNLGGANGESSLMLAKA
PASNGQWHTVYMNRIGKWFELKMDSGEGRYRNETWGPFNGRELISIRMYQIVTGAHVVFT
KNPIPDGLDLNNTCITDIRLNSKWFPMTNSENELSEAATLELEEGVANDCHRDDCKNAIC
PEGLPFAMVCFPLWGTYDCRCPAGTFPDGYNCLPIDYCERDQPCFKGATCITKPYDQNFT
CICPLGWTGRLCNLLSATDPARAGITTEFILILLSCIFALCAFAVAVYLYVRFRKKSDPE
KYILDIDPDDDIRENVINYNEEGAGEEDEDGYDISRLRRPDTVDTLGRYDPLQGKYGRRV
PGERPDVGDFIEQRLQDADEDHNAPPHDGVREFYFEGGGSDAGSLSSLQTSSGAEDQDYD
YLSDWGPKFAKLANMYGGEDEAEHLYS
NT seq
7644 nt
NT seq
+upstream
nt +downstream
nt
atggtgagcggtcctggtcagttctcaaacggtgtagagttcacgttagtagtgtcagca
caggacatggcagctggaacctcgccatcgcagaagtccgactttgccgtggtaaaagtt
cttgtcggacttagacctcctcagctgtttgaaaatcctttcagggctaaagtttatgag
agaagtggtccaggaagcaaaatattagacatggacaataattttttgcggattcgtttg
aaactgtttcaagattcggttcataacaagacaacgtttaacctgaccaaggccaatggt
aaattgtccggtttgttcagcattaccagtaccggatatgtcgagactcttcaagattta
gattacgaggaactaccaaaccagtacacgctgaatgttaccgccactgaggaagagact
ggtctctcaagcacctcgcagttgataatcgatgtagcagacgtaaatgacaacagtccg
aagtttcagttatcaacgtacacgttcatgctgtcagaaaatacccctgttggaggtcca
gctttacctttacaagttatggcgacagacagggactctggtataaatcgggagttacag
tactttgtcagtgacaaccatttcagtatacagacaaaattcatcaacaaccaatatgta
ggacagatcacagttgctcaaaaacttgactttgacttccgcactgatcatcagtataag
tttaatgtgactgctcgagataaaggtgggatcccaagatctggtatggcgagcgttatc
gtgtatgttaccaacgttaatgacgaggctccagtgtttggcattggcagcgagcatttg
ttgaccaagatcagtgaggagcagacggcaggaagtgtcgtaacaatcatacaggcaacg
gatgctgacggagataatattaaatattattttacaccgatgaacacacaaagtccacca
tttcgcattgaccccgactcaggtttgatcactttgacaagaggcctgccagagtccatt
cccttctatacgttgaacatcacagcgtacgacgacggctcatgttgtggcgaggcgaag
tctctgtccagtaacacttttatcatagtcgagatcaaagacacaaacaacaaccagcca
cagtttccaagttgtaactatgcgccaactgtactggaaaatcaagatatcggaacattt
gttgttcaggtaacagctattgacaatgatagaggaaacaatggtaatatcacatactcc
attgttacatcaccacggcaaccaaaacagttcgaagttgacccattaaacggacgagtc
gtaacagcagtacgatttgaccgagaggctctaactggtgcacgcagcattccggtcacc
gtaaaagctgctgaccagggtgagccgcaatccctcgattcacattgcacgttttgggta
cagattggtgatatcaacgataactccccaacgttcgactctccgtcatacgccacatca
gtcagcgaatcatcgtcggcatctgttaaacagggacgtagaatttttgccgtgcgtgct
actgatagagatgaaggggaaaatgcaaatatcatctacacattgacagataatcctgga
gacttcttcagcgttgagccagacactggtattatatacctggataaagggctatatggg
agagattctgtaatactgcgtgtaaaggccgaggatcagggcgaccctccactaagtgcg
tacagctctgtcaccattagtataactgatcgtaccaacaacccgcccacgtggaataac
gataactacgagagagaatatcgagtgaaagagacagctactataccatatatcatagca
gtcatggaagcttcttcaaacaccgaggcaccgttcgatggtctgtcatttgcactgatt
gactcgatggagaacacagtacaacagttagggccatttaggatatatcaagaaggaaat
acagttacacttatcttgaagggacagcttgattataatgttcaaaacagatacgagctg
cgcttgagggttacaaaccaggggcagactccactctctgctgagattcggccaatcatc
gtggtgaaggacatgaacaacgagccgccacagttcgagggtcttgacccaaccttgagt
aactcataccgaggaagtgtaccagaaaatgaaccaccgggaaagactgtgttacagata
aaagccgtggatccggatcatgatcccccaaacaatgaggtgagttacagcttgatggag
gacccaaatgatgcgtacatgcacttcaacattgataagtttactgggattataacgacg
cggagtcagtttgatcgtgaggaacagagcgtgtattatataaagataaaggctgtagat
ggtgtcaattccgatgctcctggacatttcccagagaatacaccaaatagtgctaccgca
caagttcaggttatgatagcagataagaacgacaatcccccatactttataaaggagaga
tgggaaatctccgtacctgaacaacgtgccgacagtaacggcagaattcttactgtcgta
gcgaaagatcttgacgaagctgaccagttatcatatacaataactgaagggaatgtaaat
aacgtgttcggtattaaacagaagacaggggacatttatgtagctaagacactggactat
gaaactcctccgacaagttaccagttacgtgtgatggtacaagatggcagatttgaaaac
tttacggaagtactgattgatgtgacagatgtgaatgataacccacctgagttcagtcaa
aatgtttacgagataaacaatgtagtggaagaaactatcccaccctatcctgatggtcaa
tttcttgttcaggtatcagctaccgacaaggatgtgagtcgccagagtaattttaggttc
tttatcacgggggacggcactgagcctgccgatcccgtcttcaccattgagccagacacc
ggtaaaattttcctacgtaaaaagttggacagagatcagccacatgggcgtgatgtgtac
cagttcaatgtgagggcagaggacgagcctgacaccccagcttcactttccggatacgct
tacgttaaagtcctacctctggacataaatgataatgctccagtttttagagagggtgat
ctgaagggatcagtacaggaacattctaaagcagatcagtcagtaatgacggtggtagca
acagatcatgatgccggacttaacggtacggttatctacgagattgacaggttcggtaat
ccaccggcagatccaaatggagagcacctgtttaaaataaatccagccactggacttata
cagacgagtctagccgattccctagacagagagaatattgctcaatattttgtgccgatt
gtagctaaagatcgaggagtagaacagaagagaaccagtgccacagcaacgattactata
ctcgatattaatgaccaaattccacagtttgttcagaaaatttataaagtcagtatgtcg
gagaaccagaagtctggtccagttgtgacggtgtcggcaactgataaagacatagacgag
aatgcacgattatcgtatacactgaaagaaagtgaccgggcatacttcagtgtagaagat
ataccacctaatgctggggttcttactgtttataatgaagtagattacgagacgatcaag
ttctttaacctgactgtgatcgtaaaggacaatgagccgactggtttacataaagacacg
gcctacatcgaggtgacaatagaggattataacgacaatgcgccggagttcacgcctaag
gtgaaaactatccgacacaaggaaaatattccggaagggacgttattgtggacatgtacc
gcaactgacaaagatgataccataaatgcagaatttgagtattctatagatcgtagtaaa
gatccagatcgtaggtttactgtagatcagaatggtgaggtcagagttcaacgtggtttt
gatggcgagacattagacagggaggcacttgctggactcactgaagaacgctacgaggtt
catatactagccatcgataaaggttacccaccaaagactggtacagctattctacgtata
attgttgacgatctcaatgacaatgcgccacagtttgtactgccctacccacccatggtg
atggagctggaaccgccgcccaagtttgttatcacatttagagccgaggacaaagacacg
gccagatttggtgctccgttcttcttcgcactgccgtcttgtgaagagaatccaacgtgc
aagaatggagacttagagtttacgatggaatttgatccagccggtgacaacggtaggggc
acaggaactgttactgctcagaaaacattcttccgagacaaacagaagtttcattactta
cccatcataatgtcggacatgcggggaaaaaatgatccccagagtcgtacagcaacaaac
acgatgacgatagagatcggtgatgagaacaatcaccctcatggtcccggacataaagat
atcttcgtgtataaatacgactttaaaggagactccaattctacaggtgtggatgaagat
attataataggaaatgtatattcagctgatttagatgattgggatgttgttgacaaaaat
tacgtcttctttggacctcctgccatgtcaaaatatttcagtattaacaagaacaatggt
ttaatcaaaatgaacaagcagactcctgcaggtaaacatgaattcaaggcaaaggttcat
gactttcgagtgtttacaaagataaatgcaacagcgactgtgtcagttatagtggaagag
ataacggatgaggctatttttagttccggctcgatcagattctcagggatgacagcagaa
gagttcgttacgagaccctataatgggaagagtccttatgacaaatttaggacagtgctt
gcagacaaattgaacgttccactgaacaatgtggctatatttagtgtaatgaatgtagaa
gataatcttgtagacattaggtatgctgcgcatggttcaccatattaccctccgagtaaa
ctggacagcttcgtttccctagacaaacaagagtttgaagatgcagctggcattaagatc
accatggtgaacatcgacatgtgtctgagggaaacatgcgagtccggcggttgttctaac
aaacttgtcatcggagatttcccaaatctagtcaacgctaacggcacgtctttcatcggt
gtagcaactagcgtcgtagcagaatgccaatgtgctgcaacagatttctcgtcaccgcca
gactgtacaccaggttattgtctgaatggaggacaatgtataaaagataattggggagat
gtcagatgtgtagattgtccggacggttttgatggtgcccgctgtcagatgactcgacac
agtttcagcagaggttacgcgctgtacgcgccatttgcgcagtgcgaggacagtttgact
agtatagagtttctgtctaaagaacccgatggtttaatcttttataacggtccagtagag
gagctcagcagagatgatcctcaagattttatagctctgtcgttaatcgatggctacccg
gtgctacaagttgaccatgggtcaggaagtgtgaccttgaccttggacgggcgtgacctg
aacggggatagacatttacagaagttgaatgatgggagatggcatcatgttgatattgta
aggaagggaaaggaagtgacaatgatagtggatcgttgcgatatgctggtgatagaccag
gggtcaggcagggttaccgatcgctcaccttgttcagtcagcatgaagactccgggagag
aatttattcctcaatacgaacacgatgttacagctaggcggcagatatgtacagccgact
atacccacgtctatcactgatatcagatttgtaggctgtatgagaaacttgatacataac
ggagagttatacgacctgtataccggccaatattctaagggagagaatcatgttaatgga
tgtccggacgaggataacgtatgtggtataaactccatagatgggccgaggtgtggtgaa
catggcacatgtgaggtgactgatatggtcaatgaacaatacaagtgcacatgccatacc
ggatataggtcatccggtccaggtgccaatgactgcggtacagaaacaacagtacgagac
ctgaaaatgaacagttttatgagctggtctctaaaattcgactttgtgaacacggagatt
aatccacgcaccacagaggttcagttgaagttccgaaccagggatccagacggcctgcta
ctacatttgccttcaaataatgaagagttcatcacacttgagttggttggcgggcatgta
caagttctatataatctgggcggagcgaacggcgagtcttcactgatgctcgctaaagct
ccagctagtaacggacaatggcatacagtgtacatgaacaggataggcaaatggtttgaa
ttgaagatggacagtggcgagggtcgctacaggaacgagacttggggaccgtttaacgga
cgtgaactgatatctatacgcatgtatcagattgtaactggtgctcatgttgtatttact
aaaaatccaatacctgatggtctggaccttaataacacatgtattacagacattcgtttg
aactctaagtggtttccaatgacaaactcggagaatgaacttagtgaggcagcaactcta
gagctagaggaaggtgttgcaaatgactgtcacagagatgactgtaaaaatgctatttgt
ccagaaggtcttccattcgctatggtctgtttcccactttggggcacatatgactgcaga
tgcccagctggaacattccccgatggatataattgcctgcctatagattattgtgaacga
gaccagccatgttttaaaggagctacatgtattactaaaccctacgaccagaattttacg
tgtatctgtccgctaggttggacaggaagattgtgcaatcttctgtctgcaaccgatccg
gctcgcgcaggaattacgacagaatttatcctgatattgctctcctgtatatttgctcta
tgtgcatttgcagtggcagtttacctgtatgtacggttcaggaagaaatcagatccagaa
aaatatatactagacattgacccggatgatgatatacgggaaaatgtcatcaattataat
gaggaaggtgctggtgaggaagatgaagatggttatgacatcagtagattgaggagacct
gacaccgtcgatacacttggtcgttatgatcccttacagggtaaatacggcaggagagta
ccaggtgagagacctgatgtaggagattttatagaacaacgacttcaggatgctgacgag
gaccataatgcaccaccacacgacggtgttcgtgagttctattttgagggtggcggaagt
gatgctggttccctgagctcattacaaacatcatctggcgcagaggatcaggattatgat
tatctcagtgactggggaccgaaatttgctaaacttgccaatatgtacggaggtgaagac
gaggcggagcatttatactcgtag
DBGET
integrated database retrieval system
