Ruditapes philippinarum (Manila clam): 132736718
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Entry
132736718 CDS
T09557
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
132736718
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rphi02000
]
132736718
03037 Cilium and associated proteins [BR:
rphi03037
]
132736718
Transporters [BR:
rphi02000
]
Other transporters
Pores ion channels [TC:
1
]
132736718
Cilium and associated proteins [BR:
rphi03037
]
Other cilia and associated proteins
Stereociliary proteins
132736718
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Anoctamin
Motif
Other DBs
NCBI-GeneID:
132736718
NCBI-ProteinID:
XP_060579899
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MADLREHTLLLDKTDHDNQGYTNLGYGSRKESASSFSSIDHKLTLDELLYRIQFAFLNKG
YNVEADIQQLLQECDEDDIDILLQGLNSYPLKIQQKLEISRLLRREGNMKIKYRRGKDQK
MQKRKGADSVLAMFALWEETIKKISAYFGSNVASYFQFVRTLLYINIMMMMLMVGFIIVP
EIIQGNFQTDVTYGGHFGELSNSFMFYGLYTEDLGLSYNLPLAYFLTWLSANLVCFIYII
AIMIVRYRRSKLADDRGNEYKFAWRTFCSWDHSVTSRQGVIDFRTSLKTDIKEIVREEKS
SVRVDSCTKFRNYMGRIFSNLVVLGLLVGSGFLIYEVADNEDLLKDVADFDFVRKYQLTA
TVAGLKLLVPLVFEQLVRLEGWHPRIETKITLARTTVFYIASLMIFVTSLYDVTGDLSSD
SNQVAGTGNSTSSCWENEVGEEVFKVVLVDLGILFAVGILFHLHRALWVNCTCKMIGYSK
FDVVSSVLDVVYGQCLVWLGLYFSPLLAAISVFKLIIVFYFRYLIAKVAMVPPQQLFRAS
STGNFYLALLLLNLFISLFPMTYAVI
NT seq
1700 nt
NT seq
+upstream
nt +downstream
nt
atggcagatctgagggaacataccttactgctggacaagacggatcatgataaccagggg
tatactaatcttggttatgggagcaggaaggagtcagcaagcagttttagcagtatagac
cataaattaactctagatgagttgttatacagaattcagtttgctttcttaaataaaggg
tataatgtagaggcagacatacaacagttgttacaggaatgtgatgaagatgatatagac
atactgttacagggtctaaactcttacccactgaaaattcaacaaaaactagaaatatca
aggttattacgcagagagggaaatatgaaaattaaatataggagaggaaaagaccaaaaa
atgcaaaagagaaaaggtgctgacagtgttttggctatgtttgcactgtgggaagaaaca
attaaaaagatttctgcatattttggtagcaatgtagcctcatatttccagtttgtgagg
actcttctatacataaacataatgatgatgatgttgatggttggatttattattgtacca
gagataattcagggtaatttccagaccgatgtgacttatggaggacattttggtgagctg
tccaacagtttcatgttttatggtttgtacacggaggatcttgggctgtcttacaatcta
cctctagcatacttcctgacctggttatcagccaatcttgtttgtttcatctacatcata
gctataatgatagtgaggtatcgcagaagtaagttagctgatgacagaggaaatgagtac
aagtttgcttggcgtactttctgctcctgggatcattctgtaactagtagacagggcgtt
attgactttaggacatctttaaaaactgatataaaagagatagtaagggaagaaaagagt
tcagttagagtggattcttgtaccaagtttcggaactatatgggaaggatttttagtaac
cttgtagtactgggtttactggttggaagtggattcctgatatatgaagtagctgataat
gaagatcttctaaaagatgttgctgattttgattttgtcagaaaatatcagcttacagct
actgtggcagggctcaagcttcttgttccccttgtgtttgagcagttggtacgacttgaa
gggtggcatcccaggattgaaaccaaaatcactttagcaaggacaacagtgttctatatt
gccagtttaatgatatttgtgacatcattgtatgatgtcacaggtgacctctcttctgat
tcaaatcaggttgctgggacaggaaacagtacatcatcttgttgggagaatgaagtagga
gaagaagttttcaaggtcgttttggttgacctaggcatactatttgctgttggtatccta
tttcatctacacagggcattgtgggtaaactgcacttgtaaaatgataggatacagtaaa
tttgatgttgtatcaagtgtattagatgtggtatatggacaatgtctggtatggttaggt
ctgtatttctcaccacttctggctgctataagtgtctttaaactcatcattgtcttctac
ttcagatacctaatagcaaaggttgctatggtaccgccacaacagttgttccgagcttcc
agtacgggaaacttctacctagctttactgcttctcaacctttttatcagtttgtttcct
atgacatatgctgttataga
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