Ruditapes philippinarum (Manila clam): 132736940
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Entry
132736940 CDS
T09557
Name
(RefSeq) small nuclear ribonucleoprotein F-like
KO
K11098
small nuclear ribonucleoprotein F
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132736940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132736940
03041 Spliceosome [BR:
rphi03041
]
132736940
03032 DNA replication proteins [BR:
rphi03032
]
132736940
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
132736940
Spliceosome [BR:
rphi03041
]
Complex A
U1 snRNP components
Sm proteins
132736940
U2 snRNP components
132736940
Complex B
U1 snRNP components
132736940
U4/U6.U5 tri-snRNP components
132736940
Complex C
U2 snRNP components
132736940
DNA replication proteins [BR:
rphi03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
132736940
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
132736940
NCBI-ProteinID:
XP_060580139
LinkDB
All DBs
Position
Unknown
AA seq
71 aa
AA seq
DB search
MASLPMNPKPFLNGLTGKPVLVKLKWGMEYKGYLVSVDGYMNLQVKTNFRCNNVLYVRGV
EEEDEEGEMKD
NT seq
216 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcacttccgatgaacccaaagccatttttgaatggtcttacaggaaaaccagtt
ttagtgaagctgaagtggggcatggagtacaaaggttacctggtttcagtagatggttat
atgaacttgcaggtaaaaaccaatttcagatgtaataacgtcttgtatgtacgaggtgta
gaggaagaagatgaagaaggtgaaatgaaagattga
DBGET
integrated database retrieval system
