Ruditapes philippinarum (Manila clam): 132737156
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Entry
132737156 CDS
T09557
Name
(RefSeq) serine--tRNA ligase, cytoplasmic-like
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
132737156
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rphi01007
]
132737156
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rphi03016
]
132737156
Enzymes [BR:
rphi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
132737156
Amino acid related enzymes [BR:
rphi01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
132737156
Transfer RNA biogenesis [BR:
rphi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
132737156
Prokaryotic type
132737156
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
132737156
NCBI-ProteinID:
XP_060580391
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MVLDIELFRSDKGGDPEKIRQNQAKRFKDVTLVDKVVEHDTQWRKCRYRADLLNKLKNVC
SKAIGEKMKKKEPVGEDETLPEGLQEDLESVNQEKLASLTVTQIKKLRVYIDDQTKQNDS
DLTKHESERNESLKEMGNILHESCIVSNDEDENGIERTSGDCESKKKYSHVDLIVMIDGV
DDTRGSSVAGGRGYYLKGPAVFLEQALINLAMRLLNEKGYTPLYTPFFMRKEVMQEVAQL
SQFDEELYKVIGKGSEKQEDGSVDEKYLIATSEQPIAAYHRDEWVPTETLPIKYCGYSTC
FRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMTEMITNAEEFNKQLGIPYR
IVNIVSGALNNAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQARRLKVRYGQTKKMNQEV
EYVHMLNATMCATTRAICAILENYQVEDGVIVPEVLRDLMPSQYKEKIPFVKAAPIDEQE
VKKQKKSGKKDKPKDVAEKMDKMAIGDN
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggtgttagatattgaattattccggtcggataaaggaggagatcctgaaaaaattaga
caaaatcaagcaaaacgatttaaagacgtcacgttagttgataaagtcgtggaacatgac
actcaatggagaaaatgtagatacagggctgatctgttaaacaagttgaaaaatgtgtgc
agcaaggctattggagagaagatgaagaagaaggaaccagtaggcgaggatgagacattg
cccgaaggtctgcaagaagatctcgaatctgtcaatcaggaaaaattagcttctctcaca
gtgacacagatcaagaagttacgagtgtatattgacgatcagacaaagcagaatgattct
gatctcaccaaacacgagtcagagagaaacgagtctctcaaagaaatgggcaacattctc
cacgagtcgtgcattgtctcaaatgatgaggatgagaatggaattgagaggacatcagga
gattgtgaaagtaaaaagaaatattctcatgttgacctgatagtgatgatagatggggta
gatgatactagaggatccagtgtagcaggtggtagaggctactatctcaagggaccagct
gtgtttttagagcaagcactgatcaacctagcaatgcggttattaaacgagaaaggttac
acccccctgtatacacctttctttatgaggaaagaggtgatgcaagaggtggctcaactc
tcacagtttgacgaggaactgtataaggtcataggtaaaggaagtgaaaagcaggaagat
ggtagtgtagatgagaagtacttgatagcaacatcggaacaacctattgccgcctaccat
cgtgatgaatgggttcctacagaaaccttgcccattaaatactgtggttactcgacttgc
ttcagacaagaagtaggatcccatggtagggatactcgtggcatcttcagagtccatcag
tttgaaaaagttgaacagtttgtactgacctcccctcatgacaacaaatcatgggaaatg
atgacagaaatgatcacaaatgctgaggaattcaacaagcagcttggaataccttataga
atagtcaacatagtttcgggcgctctgaacaatgctgctgctaagaaactggatcttgag
gcctggttccctggatcaggggcattcagagagttggtttcctgctcaaattgtctcgac
taccaggcaagaaggttaaaggtcagatatggccaaaccaaaaagatgaatcaggaggta
gagtatgtacacatgttaaatgccacaatgtgtgccacaactagggccatatgtgcaatc
ctggagaactaccaagttgaagatggcgtgatagtgccggaagttctacgtgaccttatg
ccatcacaatacaaggaaaagattccatttgtaaaagcggctcccattgatgagcaggaa
gttaagaaacaaaagaaaagtgggaagaaagacaaaccgaaggacgtagctgagaaaatg
gacaagatggcaataggtgacaattaa
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