Ruditapes philippinarum (Manila clam): 132737202
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Entry
132737202 CDS
T09557
Name
(RefSeq) sodium- and chloride-dependent betaine transporter-like
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
132737202
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rphi02000
]
132737202
Transporters [BR:
rphi02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
132737202
BRITE hierarchy
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
132737202
NCBI-ProteinID:
XP_060580444
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
MDVRNENNFDSVGTTTCTSAVKRHDEVLDLDSDDDSPDSSVSTNEAQTRDRGLWANKLEF
FLAITGYTVGLGSVWRFPMVCSRNGGGAFLIPFFFFLITSGGPLYYLEVCLGQFTGLSAG
LAYEFCPLLKGLGILQVLLSLTVLWYLMDVLAWTFYFLYSCFQSELPWTTCNNSWNTHRC
RAVSEVWSSVDLHNSSFQGETVVKDVYSGMLNGSASIISNVTMGNTNVTSYNSSGTSTSA
YEFWEYKVIARSSGLEDMGSIQIHLVVSFFLAWVFCVAAVIKGVKSLGKVVYITATAPYV
FLTIIFIKGLMLDGALDGMETFLKPDFSKLLTYQVWVDAAVQVFFSLGPSWGTVITMSSY
NRFHDKSFWSTTLCVCSAGFTSFYNGLVVFTLLGFMAKTTGIPLHVVASQSGPGLVFVVF
PTVLSQMPVPHLWSVLFFAMLITVAFDSLFGMFETVTSAVIDLFPHQLIRHRSAINIIGG
LIFFICELPLTMNGGIYLMQLADWYFSAFAVLFSSFFQLLAVCWLYGTDRFARDIHYMTG
RDVCVLLRIMWTIVIPSFVSVIFFIFLLQYSAPSYGDGYVYSSGAIAAGIFMGLVPIIVM
VGVGIFTFIRLKGSCLQRLKTGCSPSEKWCPHDHETKDIYLKESYVYPATKWKTFCLNIR
GSDKNTFF
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaagaaatgaaaataactttgattctgttgggactactacatgtactagtgca
gtaaaaagacacgatgaagttttggatctggatagtgacgatgactccccggactcctct
gtgtctacaaatgaggctcagactcgtgaccgtggattatgggcgaacaaactggagttt
tttctcgctattacaggatatacagttggattaggcagtgtttggaggtttcctatggtg
tgcagtcgtaatggcggtggggcatttctcattccatttttcttctttctgatcacatct
ggaggacctctttattatttggaagtatgtcttggacagttcactggcctgagtgcagga
ctagcctacgagttttgtcctttattgaaaggtttaggtattttacaagttcttctatcc
ttgactgttctgtggtatttgatggacgttttggcatggacattttattttttgtacagt
tgctttcaatcagaacttccatggacaacatgcaataattcgtggaacactcatcgatgt
agagcggtttcggaagtttggtcaagcgttgaccttcacaattccagctttcaaggtgag
actgttgtgaaagatgtatacagtggaatgttaaatggatcagcgtctatcattagtaat
gtcactatgggaaacacaaacgtgacgtcatacaacagtagtggtacaagcacctctgcc
tatgaattttgggaatataaagtgattgcacgatctagtggtctggaagacatgggtagt
atacaaatccatctggtcgtctccttttttctggcgtgggttttttgtgtagctgctgtg
atcaaaggggttaaaagtcttggtaaggtcgtatatataacggcaacagcaccctatgtg
ttccttaccattattttcatcaaaggattaatgctagatggcgctttagatgggatggaa
acttttcttaaacctgacttctccaaacttttgacttaccaggtctgggtagatgctgca
gtacaggtgttcttctctctaggaccttcttggggcactgtaataactatgtccagttac
aacagattccatgacaaatcattctggtcaacaaccctatgtgtttgtagtgcaggtttt
acatcattttacaatggattggtagtgttcacattgctcgggtttatggccaaaacaact
gggataccactacatgtagtggcatcgcagtcaggtcctgggttggtgtttgtcgtgttt
ccaacagttttaagtcagatgccagtacctcatctatggtctgtcttattctttgccatg
ttaatcaccgtcgcttttgatagcttgtttggtatgtttgagacagtgacaagtgcagtc
attgatctgttccctcatcagcttatacgtcataggtcagctatcaacatcattggaggc
ttgatcttctttatatgtgagctacctcttacaatgaacggtggtatatatctgatgcaa
ctagctgattggtatttttcagcttttgctgtcctgtttagttcatttttccagcttctt
gcagtttgttggctctatggaactgacagatttgctcgtgacattcactacatgaccggt
agagatgtttgtgtattgttacgtataatgtggacaatcgtcattcctagctttgtatcg
gtaattttcttcatcttcctgttacaatactcagcgccatcttacggtgatggatatgtt
tacagttcaggggcgatagctgcgggaatattcatgggtctagtccctatcatagtaatg
gtaggggttggaatattcacgtttatccggttaaagggctcgtgtttacagagattaaag
accggctgtagtcctagtgaaaagtggtgccctcacgaccatgaaacaaaagatatatac
ctcaaagagtcatacgtttacccagccacgaaatggaaaacattttgtctgaacattcga
ggctcggacaaaaatacattcttctaa
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