Ruditapes philippinarum (Manila clam): 132737417
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Entry
132737417 CDS
T09557
Name
(RefSeq) zinc phosphodiesterase ELAC protein 2-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rphi03016
]
132737417
Enzymes [BR:
rphi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
132737417
Transfer RNA biogenesis [BR:
rphi03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
132737417
Prokaryotic type
132737417
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Lactamase_B_4
NBD_SMAX1
PDEase_II
Motif
Other DBs
NCBI-GeneID:
132737417
NCBI-ProteinID:
XP_060580685
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MSTNPTKEVLRCHGPSFVEKVKAMLVIASDKKRNFFPTCEQRGIKDVKFKDDQLTVEYVE
LLHAACDGKTPQLYDSWAFKKKVFNEIEGSNGIYETALNGKKTVMCYIIKLANLSTNVDI
SKMLKLNISSGPWIKQLVSGKSVTLEDGRVIHPKDVMTNYKTAAGPIVVLDCPTEDYLES
LITNKQLLDLQTDNVKPVLMIHMAPAALITDPGYQAFMDRFQSETTHLMMNEDSPGPYIH
KSQMFQSVLNRLHAQISPVLQGKYNYNMRPTPTTGRIVQACPGLKYTIRPEKDEGFNWDS
LPYYDAEEYFHNVKEEAVNESLEVIKYLDYEKHSINLKHMTVSDVENEINLLKKKLNARE
ALTEDKDYPEVVFLGTGSGKPSSFRNSSSILLQIRKDEYFLMDCGEGTLLQMYQMYGLEK
TQHILRNLKGVFITHLHFDHHGGLFSIIEVVNNEMRQKRRMDKLTIIAPITFSSLCQHHS
RYLNPIENSYKFIPNHALYDDVKTNPNSYVLREVKNLLGLSELAIVPVYHSVKAYGICMR
HKDGWKLVYSGDTEPCDLLIRYGQNCDILIHEATLDGGKEESAARKRHSTVTSAIQVGRD
MNAKFIILTHFSQKYAKLPVFPEESTKNVAYAFDFMQLRPSQLWTLHLVKPALNALFGGQ
RDSKFFRVLLQAKRDERWMGKKAVNVEELAD
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgaatcccactaaagaagtgcttcgttgtcatggaccatcatttgtggaaaaa
gtcaaggctatgctggtgattgcctcagataagaaacggaatttttttcctacttgtgag
cagcgtggtataaaagatgtaaagtttaaagatgatcaattaactgttgaatatgttgaa
ctacttcatgctgcatgtgatggaaagacaccacagctttatgatagctgggcatttaag
aagaaagtttttaatgaaattgaaggatcaaatgggatttatgaaactgcattaaacggg
aagaaaacggtgatgtgctatataataaagctggcaaatctttcaaccaatgttgatatt
agtaagatgttaaagctaaacattagcagtggtccatggataaaacagcttgtgagtggt
aaaagtgtgacactagaagatggacgagttattcatcctaaagatgtaatgactaattat
aaaactgctgcaggacccatagtagtgttggattgtcctacagaagattatcttgagtcc
ttgataacaaacaaacagttgttagacctgcagacagataatgttaaacctgtgttaatg
atacatatggcgccagcagctctgataactgatcctggctaccaggcgtttatggacaga
ttccagtctgaaactactcacctgatgatgaacgaggactcgccgggtccgtatatacat
aaaagtcaaatgtttcaatcagttctgaatcgcttacatgctcaaatatctcctgtcctg
caaggaaagtataactacaatatgagacctactcctactacaggcagaatagtacaagca
tgtcctggcctaaaatataccatcagacctgaaaaagatgagggctttaattgggatagt
ttgccatactatgatgctgaagaatatttccacaacgtgaaggaggaggccgtgaatgag
tctcttgaagtgatcaaatatttagattatgaaaaacattctatcaacctgaaacatatg
actgtttcagatgttgaaaatgaaataaatcttttgaaaaaaaagctcaatgcaagagag
gcccttactgaagataaagattatccagaggttgtgtttctgggcactggcagtggcaag
ccatcatcattcaggaattccagcagtattcttttacaaattaggaaggatgagtatttt
ttaatggactgtggtgaaggaacattactacaaatgtatcagatgtatgggctggaaaaa
acccaacatattctacgtaacctgaaaggagtgtttatcactcatttacactttgaccat
catgggggactttttagtattatagaagttgttaacaacgaaatgagacagaaaagaaga
atggataaactgactataattgctccgataacatttagtagcctgtgccagcatcattct
agatatttaaaccctattgaaaattcatacaagtttattcctaaccatgctctttacgat
gatgtcaaaacgaaccctaattcatatgttctgcgagaagttaaaaacttacttggtctt
tcagagttagcaatagtaccagtttatcattcagtaaaggcatatggtatatgtatgaga
cacaaggatggctggaaactagtctactcgggggacacagaaccatgtgacctgctgatt
cgttatggtcaaaactgtgatatccttatacatgaggcaactttagatggtggtaaagaa
gaaagtgctgctaggaaaagacacagcacagtaactagcgctattcaagtcggaagggat
atgaatgcaaaattcattatacttacacattttagtcagaaatatgccaagctcccagtc
ttccctgaagaaagcacaaaaaatgttgcttatgcatttgacttcatgcagttgcgtccc
agccaattatggacacttcacctagtaaagccagcactgaatgctttatttggtggtcaa
cgagacagtaaattcttccgagtgttgttacaagccaaaagagatgagcgttggatggga
aagaaggctgttaatgtggaggagctagccgattag
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