Ruditapes philippinarum (Manila clam): 132737591
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Entry
132737591 CDS
T09557
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2-like
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132737591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rphi03041
]
132737591
03110 Chaperones and folding catalysts [BR:
rphi03110
]
132737591
04121 Ubiquitin system [BR:
rphi04121
]
132737591
Enzymes [BR:
rphi01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
132737591
Spliceosome [BR:
rphi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
132737591
Complex C
U4/U6.U5 tri-SnRNP related factors
132737591
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
132737591
Chaperones and folding catalysts [BR:
rphi03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
132737591
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
U-box type E3
132737591
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
SUB1_ProdP9
Motif
Other DBs
NCBI-GeneID:
132737591
NCBI-ProteinID:
XP_060580887
LinkDB
All DBs
Position
Unknown
AA seq
389 aa
AA seq
DB search
AIERLNIKANFWRDLITDEPFIRKELITIQDPSNLDKFNIQKFYYVKNNLKAGEEDEDGG
SRGSTSKLKTVNAETQDILETLEKEYQAPEKKPEIKRKADRFNSAHYSTGAVAASFTSTA
MVPETEHHAAIIDEDIIRYGRLKKKGYVRIVTNYGQLNIELHCDMVPKTCENFIKLCKKG
YYNDTVFHRLIRNFMIQGGDPTGTGTGGESCWGGSFKDEFKPNLTHAGRGILSMANSGPN
TNKSQFFLTFRSAKHLDGKHTVFGRVVGGLETLDAVEKIDVDKKDKPVKEIKIEGCAVFV
NPYEEVDEELAKEREEELSRQAQEDADRKKPKSKKEEPSFVPKSFTSGVGKYINPSTLKR
HTTDDSDSSTVTAKKKVKAKSSLSDFSSW
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
gctatagagaggttaaatatcaaggcaaacttctggagagatttaattactgatgaacca
tttattagaaaagagcttattacaatacaggacccatcaaatcttgataaattcaacata
cagaagttttattatgtgaaaaacaatttaaaggcgggagaagaagatgaagatgggggt
agcagaggcagtacaagtaaactgaagactgtgaacgctgagacacaagatatcctagag
acactagagaaggaatatcaggccccggaaaagaaaccggagatcaagagaaaagctgac
agatttaattctgcccattactccacaggagcagttgcagcatcattcacctcaacagct
atggttccagagacagaacatcatgctgctatcattgatgaggatattataaggtatggg
agattaaagaagaaaggatatgtacgtattgttacaaactacggtcaactcaacattgag
cttcactgtgatatggtgccaaagacttgtgagaattttatcaagttatgtaagaaggga
tattacaatgatacagtgttccataggcttatcaggaatttcatgatccaaggaggggat
cctacaggtactggcacaggtggagaatcatgttggggaggtagttttaaggacgagttt
aaacccaatcttacacacgcaggacgaggtattctcagtatggctaactcaggaccgaac
acgaacaaatctcagttcttcttaacatttagatctgctaaacatttggatgggaaacat
actgtgtttggaagagtagttggtggcttagaaactctagatgctgtagagaagatagat
gtggacaagaaagacaagcctgttaaagagataaagattgaaggatgtgctgtgtttgtt
aacccctatgaagaggtcgatgaagagttggctaaggagagagaagaggagttaagtcga
caggcacaagaagatgccgacagaaagaagcccaagagtaaaaaggaggagcccagtttt
gtgccaaagtcatttacatcaggggttggcaaatatattaatccaagtactttgaaaaga
cataccacagatgattctgattccagtacagtaactgcaaagaaaaaagtgaaggcaaaa
tctagtttgagtgactttagttcatggtga
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integrated database retrieval system
