Ruditapes philippinarum (Manila clam): 132737879
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Entry
132737879 CDS
T09557
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-like
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04080
Neuroactive ligand-receptor interaction
rphi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132737879
04082 Neuroactive ligand signaling
132737879
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rphi04040
]
132737879
Ion channels [BR:
rphi04040
]
Ligand-gated channels
GABA-A
132737879
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
132737879
NCBI-ProteinID:
XP_060581234
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MSAKDNIRTNKGCLSDMDYFLRTVILMWPILTVLAFQGATTQDLSMKFKNASEAIERLLD
GYDIRLRPDFAGDPLSIGIEVILASFDAISEVNMDYTITMYLNQYWEDNRLAFSSNETDS
MTLSGDFAEKIWVPDTFFANDKNSFLHDVTEKNKMIRLFGNGSIIYGMRFTTTLACMMDL
HHYPLDVQNCTVEIESYGYAMSDVELYWRTESVHNVDNVELPQFDVVEYKAINKIESLLT
GKYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT
TISNGVRSSLPRISYIKAIDIYLVMCFVFVFAALLEYAAVNYTYWGARAKRKAKKVKDGG
TTNILRGPGIDRNSKEMEQETCIEEANNINISPLPAIRKSYQHVFNFETEVTNEPPVIRM
APVLPRTCVAKGYTPNSLLRRRNGNLVQKRKLLSTVKQTAKILKPKLPVVRDVNVIDKYA
RLLFPLLFIVFNITYWGYYLIKQYQSHR
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgaaagataacatacggacaaataaaggatgtctttcagacatggattatttc
cttagaactgtaatattgatgtggcccatattaaccgtgctagctttccaaggagcgact
acccaagacttatcaatgaagttcaaaaatgcatcagaagccattgagagactgttagat
gggtatgacattcgactgagaccggattttgcaggcgacccgctgtcaattggaatagag
gttattttagcaagctttgatgctatttcagaggtcaacatggactatactataacaatg
tacttgaatcaatactgggaggataacagacttgccttctctagcaacgaaactgacagc
atgacattatcaggagatttcgcagagaaaatttgggtgcctgatacatttttcgccaat
gataaaaattcttttttacatgatgtcacagaaaagaacaaaatgattcgactttttgga
aacggttcaatcatctatggtatgagatttacgacaacattagcgtgtatgatggatcta
catcattatccacttgatgtccagaactgtacggtagaaatagaaagttacggctatgcg
atgtctgatgtggaactgtactggagaactgaatctgttcataatgtagataatgttgaa
ttgccccagtttgacgtcgtcgaatataaagcaataaataaaatagaatctttattaaca
ggaaaataccagcgattgtctcttagtttcaagctacagagaaatattggctactttgta
ttccagacgtatctaccatctatactgatcgttatgttatcttgggtttcgttttggatc
aatcatgaagcgacgtcagcacgagtagcactaggtataacaacagtgttaaccatgact
acaatcagtaatggtgtacgatcttccctgccacgtatatcatacatcaaggctatagac
atttatcttgtaatgtgttttgtgtttgtgtttgccgcgttactagaatatgcagctgta
aactacacatactggggggcacgtgcaaaacgaaaagctaagaaagtcaaggacggagga
acaaccaatatcttacgtggtccagggattgacagaaattctaaagaaatggaacaagaa
acctgcatagaggaggcaaacaacataaacatttcacctctacccgccatccgtaaatcg
taccaacatgtgtttaattttgagacagaagtaacaaatgaaccaccagttatcagaatg
gcgccagtacttccgcgaacttgtgttgctaaaggatataccccaaattctttgctcaga
aggcgaaatggaaaccttgtacagaagaggaaacttctgtctactgtcaaacaaacagct
aaaatattgaaacctaagttgcccgtagtaagggatgtgaatgtcatagacaaatatgca
cgacttctgttcccgttgttgtttatagtattcaatataacttattggggctattatttg
atcaagcagtaccagtctcatcggtaa
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