Ruditapes philippinarum (Manila clam): 132737953
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Entry
132737953 CDS
T09557
Name
(RefSeq) uncharacterized protein LOC132737953 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132737953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rphi03041
]
132737953
03009 Ribosome biogenesis [BR:
rphi03009
]
132737953
Enzymes [BR:
rphi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132737953
Spliceosome [BR:
rphi03041
]
Complex A
U1 snRNP components
U1 related factors
132737953
Complex B
132737953
Ribosome biogenesis [BR:
rphi03009
]
Eukaryotic type
Pre-60S particles
Helicases
132737953
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
132737953
NCBI-ProteinID:
XP_060581320
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
MSYRDRMTGSTGRSDRKPLGLGSHGLPSSFGGSRGGRDDRFGGGRGGFGGGRGGGGFGGR
KEKGSQPGSTLRKPKWDMDRLQKFEKNFYVEHPRVTNRSPAEIQAYCSANQITSTGHNVA
KPILSFDEACFPEYVMTCIRSQSWTQPTPIQAVGWPIALSGRDVVGIAQTGSGKTAAFIL
PSIVHINHQPYLERGDGPIALVLVPTRELAQQVQEICSEFGSTSSIRNCCVYGGAPKGPQ
IRDLERGAEICIATPGRLIDFLETGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVEQVR
PDRQTLMWSATWPKEVRQLAEEFLTDYVQMNIGALQIHANHNILQIIDVCQEAEKDMKLM
KLLEEIMQEKENKTLMFVETKRKADELQRRMKRDGWPVLCIHGDKSQPERDWVLSEFKNS
RVPLLIATDVASRGLDVEDIKFVINFDYPNSSEDYVHRIGRTGRSSHTGTAYTFFTPGNI
KQAKDLIDVLQEAKQVVNPKLLQLAESSRGFGRGRYRGGGGGYGGGSRFGGGSRFGGGSG
GRGGSRFDSGGRGGFGNRDSEQKGFGNTTKGFGNTTGRGGATGTGMAGSRGAGRGGFSSN
QNGTMNGFGAQQQNSYGNGGAGYGQQQSYNGWNSMQK
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacagagatagaatgacagggtcgactggcagatctgatagaaaaccgctgggg
ttaggttcacatggtttaccatcatcttttggtggatcaagaggtggaagagatgatcgg
tttggcggaggtcgtggtggatttgggggtgggcgaggtggtggtggatttggtggacga
aaagaaaagggttcacagccaggttcaacactgagaaaaccaaagtgggatatggataga
ctacaaaagtttgaaaagaatttttatgttgagcatccaagagtaacaaatagatcacct
gctgaaatacaggcctattgtagtgccaaccaaattacttccactggacataatgttgca
aaaccaatattaagctttgatgaagcctgttttccagaatatgtgatgacctgtatacgt
tcccagtcttggacacagcccacacctatacaagctgttggctggcctatagctctctct
ggtagagatgttgtaggaattgcacagactggttcaggcaaaactgctgcttttattttg
ccatcaattgtacatatcaatcatcaaccataccttgagagaggtgatggtcctatagcc
ctagtccttgtaccaacaagagaattggcacaacaggtacaagaaatctgttcagagttt
ggctctacatccagtatacgaaattgctgtgtttatggtggtgcaccaaagggaccacag
attagagatcttgaaagaggtgctgaaatttgtatagccacaccaggtagacttatagat
ttcctggaaactggaaagaccaatctcagacgcacaacatatctagtcttagatgaggca
gatcgtatgttagatatgggttttgaaccccagatcagaaagattgtagaacaagtcagg
cctgacagacaaactttgatgtggagtgctacttggccaaaagaagttagacagttggca
gaagaatttttaacagattatgtacagatgaatattggggctctacagattcatgctaac
cataacattcttcaaataattgatgtttgtcaggaagcagagaaagatatgaagttaatg
aagttactggaagaaatcatgcaggaaaaagaaaacaagacccttatgtttgtagagacc
aagcgcaaagctgatgaattacaacgcagaatgaaaagagatgggtggccagtattgtgt
attcatggtgataaatctcagccagaacgagactgggttttaagtgaattcaaaaacagt
cgagtaccgcttctgatagctacagacgttgcttcccgtggactagatgtggaagacata
aaatttgtgatcaactttgactaccccaactcatcagaagactatgtacacagaataggt
cgtacaggtagaagttctcacacaggaacagcttacacattcttcactccaggcaatata
aaacaagcaaaagatcttattgatgttttacaagaggctaaacaggttgtcaacccaaaa
ttactacaactagcagaaagttctagaggatttggcagaggtcgttatcgtggaggcggt
ggaggatatggtggtggatcaagattcggcggtggatcaaggtttggtggtggatcagga
ggtagagggggctcccgctttgactctggtggtcgtgggggatttggtaaccgtgacagt
gaacagaaaggttttggaaatacaacaaaaggatttggtaatacaactggtagaggtgga
gccacaggaactggaatggctggaagtcgtggtgcaggaagaggcgggttctcaagtaat
cagaatggaacaatgaatggatttggtgcacaacaacaaaacagttatggtaatgggggt
gctggctatggtcaacagcagtcatataatggctggaattcaatgcaaaaataa
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