Ruditapes philippinarum (Manila clam): 132738212 Help Entry 132738212         CDS       T09557                                  Name (RefSeq) toll-like receptor 4   KO K18808   toll-like receptor 13 Organism rphi  Ruditapes philippinarum (Manila clam) Brite KEGG Orthology (KO) [BR:rphi00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04054 Pattern recognition receptors [BR:rphi04054]     132738212 Pattern recognition receptors [BR:rphi04054]  Membrane-bound pattern recognition receptors   Toll-like receptors    132738212 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  LRR_8 TIR TIR_2 LRR_4 LRR_EndoS LRR_14 LRR_6 Motif Other DBs NCBI-GeneID:  132738212 NCBI-ProteinID:  XP_060581663 LinkDB All DBs Position Unknown AA seq 866 aa AA seqDB search MNFVLLLAWIISIVDSTSLPCGPDGLCHCEHINVMDCSKTNELPLRNVCDYIDDSKGVKI NILHLEQNGYKYIRTEDIKGCKSLKSLYLRGNEISYVEDVSLIKFDNLKTLDMSYNQLDV YNKRGTLAFKLPQSLIKLVLNGNLNVSDSAGVMYPNLSNLTNIEQLIFDGLKDTNFPVSY SEMQSLRSVSLSGLDGNCNMPYVSNDTFKHLTHIRTLNLSSCDIENVTAGVFEKLKNLEV LDLSHNMNLGFRKAMNITYSLQFTKIKSLNFSKLYPTFGLGTQLKLQDVCYLWNTNLTEI VLNDNRIQLVERNALILTPSTLKILRVEGNTFTFGQYLFQLGCFAHLEECYGNFQNHARD PYLYMEEPKIDESEFVSTNLNCPYTAPDVLINISKKKRVCPYFKDNNINMNKTLPTSPPE MKRLEFSNCGMQYNVTSVLVNPTPYKMEYLDGSGNIFYSWIGPFGPFPNVKYLNLSRNYC THIGLKFFDSFRNVENLQIQENFLGLILSDKYYGPGIFEKLSKVKVLNLSSNIISYLHPA AFSNMVHLTTLDLSVNNIESLAIDVGSLNNLIHLNLKFNFIHSVPSYLREKLELNSKRLN KSFTIDLSNNTLSVSCNEKEFLEWMVKHRMNMLNFDHYTFYNMSGQRVDAERFVKDVIKL YMDCGSYSMIIVACSIGISIFLSVVIGGVVYRNRWNLRYLMRMTKIKHFGYIRLHQYFNE PERFMYDAFISYANEDVRLILDVMIPKLEGQGLKLCLHDKDFLPGNNIADNILQAIGNSR KTVAVISQQFLKSNWCLFEFNMARMESIYSRGGNSCLIIVILEDVPTRNMSDEMLDWMRT NTYIEYTQEANGELLFWDNFLQVLNE NT seq 2601 nt NT seq  +upstreamnt  +downstreamnt atgaactttgtattgttgctcgcgtggattatcagtatcgttgattcaacatctcttcca tgtggacctgacggattatgtcattgtgaacatataaatgttatggattgttccaaaact aatgagttaccattacggaacgtatgtgactatattgatgacagtaaaggtgtcaagatt aatattttgcacctggaacaaaatggatacaaatatattcggacggaagacataaaaggc tgtaagtcattgaaaagtctgtatctaagaggaaacgaaataagctatgtcgaagacgtt tctttgataaagtttgataatctaaaaacgcttgatatgagctataaccagcttgatgtt tataataaaagagggacactagcatttaaacttccgcagtctttaataaagcttgtgctt aacggaaatctgaatgtttcggactctgccggtgttatgtatccgaacctttcgaatctg actaatattgaacagctcattttcgacggactgaaagacacaaatttccctgtatcttac agtgaaatgcaatcattacgtagcgtatcattgtctgggttggatggaaattgtaatatg ccttacgtttcaaatgacacatttaaacacctaactcatataaggacattgaatttgtcg tcttgtgatatagaaaatgtaacagctggagtgtttgaaaaactcaagaatttagaagtt ttagatctgtctcacaacatgaatcttggatttcgtaaagcaatgaacattacatacagt ttacaattcacaaaaattaaatcattgaatttttctaaactttatccaacatttggactt ggaactcagttaaagttacaagatgtgtgttatctttggaatacgaacttaactgagatt gttttaaatgataatagaattcaattagtagagagaaatgctttaattttgacgccaagc actttgaaaatcttacgtgtagaaggcaacacgtttacttttgggcaatatttatttcaa ctagggtgttttgcacatttagaagaatgctatgggaatttccaaaatcatgctcgtgat ccttacttgtatatggaagagcctaaaatagatgagtccgaatttgtgtctaccaacttg aattgtccatatactgcaccagacgtattgattaacataagtaaaaagaaaagagtatgt ccatatttcaaggacaataatataaacatgaacaagactttgcccacatctccaccggaa atgaaaagacttgaattttcaaattgtggcatgcagtacaatgtaactagtgtgttagta aacccaactccctataaaatggaatacctcgatggctcgggtaacattttttactcctgg attgggccatttggcccatttccaaatgttaaatatcttaacttatctcgcaattattgt acacacattggactaaaattctttgatagctttcgaaatgttgaaaatcttcagattcaa gagaactttctagggttaattctctcagataaatattacggaccaggtatatttgaaaag ttatcgaaagtgaaagttttgaacttatcgtcaaacattatttcctatctacatccagct gcattttcaaacatggtacatctgaccacattagacctcagtgtgaacaatattgagtct ttagcaattgacgttggttcgttgaataatttgatacatttgaacttaaaatttaacttt atccactcggtcccgtcttatcttagggagaagctggaattaaattcaaaacgtctcaac aagagcttcacaattgacctcagtaacaacaccttgtcagttagttgtaatgaaaaggag tttttggaatggatggtgaaacatagaatgaacatgctaaatttcgatcattacactttc tacaacatgtctggtcagcgcgtggatgcggaacgatttgtgaaagatgtaattaaactt tatatggattgtggttcttacagtatgattattgtagcttgctctataggtatatccata ttcctgtcagttgttattggtggtgttgtatacagaaatagatggaacttacgatatctt atgcgcatgactaagatcaagcattttggttatatcagactacatcaatactttaacgaa ccagaaaggtttatgtatgatgcttttatttcatatgcaaacgaagatgtacgtttaatt cttgacgttatgataccaaaactagaaggacaaggtttaaaattgtgtttacatgataaa gactttttaccaggtaacaatattgctgacaatattctacaagccattgggaatagcagg aagaccgtcgctgttatatctcagcagtttctaaaaagcaattggtgtttgtttgagttc aatatggcaagaatggaaagcatttactctcgtgggggtaatagttgtcttatcattgtt atattggaagacgttccaacaagaaatatgtcggatgaaatgttggactggatgagaacc aacacatacatagagtacacacaagaggcaaatggtgaactactgttttgggacaatttc cttcaagtcttaaatgaatga

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