Ruditapes philippinarum (Manila clam): 132738330
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Entry
132738330 CDS
T09557
Name
(RefSeq) tubulin polyglutamylase TTLL5-like isoform X1
KO
K16602
tubulin polyglutamylase TTLL5 [EC:
6.3.2.61
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rphi03037
]
132738330
04812 Cytoskeleton proteins [BR:
rphi04812
]
132738330
Enzymes [BR:
rphi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.61 tubulin-glutamate ligase
132738330
Cilium and associated proteins [BR:
rphi03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
132738330
Cytoskeleton proteins [BR:
rphi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylases
132738330
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TTL
ATPgrasp_YheCD
ATPgrasp_ST
PRIMA1
Motif
Other DBs
NCBI-GeneID:
132738330
NCBI-ProteinID:
XP_060581796
LinkDB
All DBs
Position
Unknown
AA seq
1353 aa
AA seq
DB search
MASTKDVDSDGGSFTPSDGSSSDERSERDSDYESEEEDVSSKPSMNLQWTGYGKKTPVIL
FNAACLYNKRSSMRTVGERYHMTYKFGNSECKIVRNIFNSHGFHEVHPNSSDYNIVWTGA
HLKPFTLRSLSEFQKINHFPRSYELTRKDRLYKNLQRMQQIKGVKNFDIIPASYVLPGEY
QEFCTAFLKDKGPWIVKPVASSRGRGIFLVNHPDQIPLDENIIVCRYISNPLLIDGFKFD
VRLYVAVTSYDPLQIYLFEEGLTRFATVKYEKSMRHMRNHCMHLTNYSVNKKNDEYVKND
DADIEDYGNKWSLGAMLRYLRSNGKDTAALMMKIEDCVIKTILSVELPIATACKMFMPFK
GNCFELYGFDIMIDDNMKPWVIEVNLSPSLACDSPLDMKIKSNMLCDLFSLTGIICHDPM
MRTLQQSKRNQDIASKMAARVKSAGAKPALSSMKQRPSSAGSMKRGANSSSESATNKSLS
GLNSDEIRIVRRAKEEEARKGGWVRIFPTADSWDLYSSFLQFTTTNNLMVHQKLFPERHK
NSSTAVVSRSSTSAGSRAKGEVNQKLTLSAYIQLANNSSNVKPTVELAAAYAQAMLRTRR
YERKLGTKRSRSKRRRRNARQERRKLVQGVPEDSGEEQEENEDEEPPITERNISEQNNTM
SQKVEKPPAKTQSEDLIKIVVEKEARQESRSDKRTGLAALAKNNVDNSAVSSAEVKGDHS
SNTVENGAEINKGSRSRSASPPAPPPPPPPKYNVVELLQKGRTLSKVQARTAFAMYLVRV
QQRLTTDCNSMTQDDMDGLNEQMDLVLRFLKRAAVNLQQSFKVVVPSRKLPLNDRRRILA
KQLGDFVHIYNKETEQLRARKHLERKHTHLRRAESVDALDEDKFDRFVHTASEGELEEVL
TTYTKINKSASIFLGGKATGETTSHVPTTGNSMQHIGASSPVMRTDSQVQLNRRKDSDTS
ERSTTQTKTVTGWEEVPKAIHSVPTSSNDLRPHSSHTGSHSNVGYGTRPASYNTNSAASY
ANAVQIYTQKLSSLRPRSATTAHKTEKQVRSRPSSAVMARSGSAANSAYGSTADLQDPYN
DKVITEALQRLTMRQQARQYSAYNGTSLVPSDSASRPSSACGNRDHPDSRTPVNVHDTNS
LQHINSSSSAPQVDKGSGDINSKYIYMEEHVTKNRPPSGTLPKRSPSAIDMKSFEAHRRK
QSNVNLQSANATFNSFIEDTGPNWQNDLALAYNQVTGVTPQNYHTPTQSSKQFQIMQQQA
LKQQSKVLLEQSKAKHQAMIAQAHAVQKSLLKLDRPESEATMVQMYAPKPPVRPGTRKAA
SAHHRMPRRAVPEETSLNFQFCSTDKSNVNGGW
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaacaaaagacgtagattctgatggaggctcatttacaccatctgatggtagc
tcatctgatgaaagaagcgaaagagattctgattatgagagtgaagaagaagatgtctca
tctaaaccttcaatgaatttacaatggacagggtatggaaagaaaacgccagtaattttg
ttcaatgcagcatgtttatataacaagcgctccagcatgagaactgttggggagagatat
catatgacctacaagtttggtaactctgaatgtaagattgtcagaaatatatttaacagt
catggctttcatgaagttcatcctaacagttctgattacaacattgtttggacaggggcc
catctaaaacctttcaccctacgcagtttgtcagaatttcagaaaattaaccattttcca
agatcatatgaattaactaggaaagacagattatacaaaaatctacaaagaatgcaacag
ataaagggagtgaaaaactttgatattatacctgcaagttatgtgttacctggggagtat
caagaattctgtaccgcttttctcaaagacaaaggtccatggattgtgaaaccagtggca
tcgtctaggggcagaggaatatttctggtgaatcatccggaccagataccactggatgag
aatattatagtatgtagatatatatcaaaccccttgttgatagatggcttcaaatttgat
gttagattgtatgtggctgtcacatcatatgatcctctacaaatatacctgtttgaggag
ggcttaaccaggtttgccacagtgaaatatgagaaaagtatgaggcatatgagaaaccat
tgtatgcatctaaccaactatagtgtgaacaagaaaaatgatgaatatgtcaagaatgac
gatgctgatatagaggactatggtaataaatggtcccttggtgctatgttgagatatcta
cgatctaatggtaaagatacagcagctttaatgatgaagattgaggattgtgtaataaaa
acaattttgtctgtagaactgcctattgctactgcctgtaaaatgttcatgcctttcaaa
ggcaattgttttgagttatatggttttgatattatgatagatgacaatatgaagccatgg
gtgatagaggttaatctgtcaccttccctagcttgtgatagtcctcttgacatgaagata
aaaagcaatatgttgtgtgatctctttagtttgacgggtataatctgtcatgaccctatg
atgagaactcttcaacaaagtaaaaggaatcaggatatagcttccaaaatggccgccaga
gtaaagtcagcaggagcgaagccagctctgagttcaatgaaacagcggccatcttctgct
ggcagtatgaagagaggggcaaatagtagtagtgagagcgccaccaataaatcattgtct
ggtttgaatagcgacgaaataagaattgtgaggcgagcaaaagaggaagaggcccgtaaa
gggggctgggtcagaatatttcctacggcagactcgtgggacctctactcaagtttcctg
cagttcacaactaccaataatttaatggtgcaccaaaaactttttccagaaaggcataaa
aattcatcaacagcagttgtgtcaagaagttctacttctgccggttctagagcaaagggt
gaagtaaaccaaaaattaacactgagtgcatatattcagttggcaaataattcaagtaat
gttaaaccaacagtagagctggcggcagcttatgctcaagcaatgttacgcaccaggaga
tacgagagaaagctgggaaccaaacgaagtagaagtaaacgaagaagacgtaatgcaaga
caagaacgtagaaagttagttcaaggtgtaccagaagattccggtgaggaacaagaagaa
aatgaagacgaggagcctccaattacagaaagaaatatatccgagcaaaataacactatg
tcacaaaaggttgaaaaaccacctgctaaaacacaaagtgaagaccttattaaaatagtt
gttgagaaagaggcgagacaagagtctcggtcagataaacgtacagggcttgcagccctc
gctaaaaataatgtagacaatagtgctgtgtcgtcagctgaagtgaagggagatcactct
agtaacactgtagaaaatggtgctgaaataaataaaggttcaaggtcaaggtcagcatca
ccacccgcccctccaccaccaccgccaccaaaatataatgttgtagaacttttgcagaaa
ggtcgtacactaagtaaagttcaggctagaacagcatttgccatgtatttagtaagagta
caacaaagattgacaactgactgtaactctatgacacaagatgatatggatggtctcaat
gaacaaatggatctggtattgaggtttttgaaacgggctgcagtcaatcttcaacaatca
tttaaagttgtggtacccagtagaaaactgccattaaatgacaggcgcagaatccttgca
aaacagcttggagattttgtacatatatataacaaggaaacagaacagttgagagccagg
aaacatttagagaggaagcatacacatttaagacgtgcagaaagtgttgacgccctcgat
gaagacaagtttgacagatttgtacatactgcaagcgagggtgagttagaagaggtttta
acaacatatactaaaatcaacaaatcagcaagcattttcctgggaggtaaagctacaggg
gagacaacttcacatgtacccacaacaggtaattcaatgcagcatataggagcatcatct
cctgtaatgaggacagattctcaggttcagttaaacagacggaaagacagtgacacatct
gagaggtctacaactcagacaaaaactgtcactggctgggaggaggttccaaaagctata
catagtgtaccgacctctagtaatgaccttcgacctcattcctcacatacgggtagccat
agcaacgtaggctatgggacacgacctgcttcctacaacacaaactctgcggcctcgtat
gccaatgctgtacaaatatacacccagaaactatcctcactgaggcccagatctgcaacc
actgctcacaaaacagagaaacaggtacggtcacgcccgtcgtcagcggtgatggcgcga
tcagggtcagctgctaatagtgcatatggaagtactgcagatttacaagatccatacaac
gataaagttataactgaagctcttcagcgtcttacgatgagacagcaagctcggcaatat
tctgcctacaacggaactagtttagtgccgtccgactctgctagtcgaccttcgtctgct
tgtggtaacagggaccatcctgattccaggacaccggtgaatgttcatgacactaattca
ttacaacatatcaatagctcaagcagtgctcctcaagttgacaaaggtagtggtgatata
aatagtaaatatatttacatggaggaacatgttactaaaaatagaccaccctcaggtacg
ttaccaaaacgctcaccttctgccatagacatgaaatcattcgaagctcatcgaaggaaa
cagtcaaatgttaatctacaaagtgccaatgctacatttaatagttttattgaggatacg
ggacctaactggcaaaatgatcttgccttagcatacaatcaggtgacaggtgtgactccc
cagaactaccatacacccactcagtcaagcaaacagttccagataatgcagcaacaagcg
ctgaagcaacagagtaaagtgttgttagagcagagtaaggctaaacatcaggccatgatt
gcccaggcacatgctgtacagaaatcattgcttaaacttgaccggcccgagtcagaggca
accatggtgcagatgtatgcaccaaaaccacctgtacgaccaggcactaggaaagcagct
agtgctcatcatagaatgccaagacgagcagttccggaggagaccagtcttaatttccag
ttctgttctaccgacaaatcaaatgttaatggaggatggtag
DBGET
integrated database retrieval system
