KEGG   Ruditapes philippinarum (Manila clam): 132738371
Entry
132738371         CDS       T09557                                 
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF3-like
  KO
K12171  E3 ubiquitin-protein ligase SH3RF [EC:2.3.2.27]
Organism
rphi  Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rphi01009]
    132738371
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rphi04121]
    132738371
Enzymes [BR:rphi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     132738371
Protein phosphatases and associated proteins [BR:rphi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     132738371
Ubiquitin system [BR:rphi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    132738371
SSDB
Motif
Pfam: SH3_9 SH3_1 SH3_2 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-RING_5 zf-C3HC4_4 zf-RING_11 zf-RING_4 zf-RING_6 zf-RING_10 zf-rbx1 Prok-RING_4
Other DBs
NCBI-GeneID: 132738371
NCBI-ProteinID: XP_060581842
LinkDB
Position
Unknown
AA seq 767 aa
MDEQALNELLECSVCLDQLDDTSKVLPCQHTFCKRCLEEIVSTKHELRCPECRFLVEMRV
EDLPSNILLIRLLEGLKSQTRIGGTQGPGRRRELGSPGASKADNPNQAVAAFARQQQQRQ
ASTSNRPCAKALFTYDAKEAGDLSFKKGDVVYLWKQVDENWFQGELNGQHGFFPVNYVQV
ITALPEKIPQCKGLYDFIVDDDKEGDCLPFKKDETMTVIRRVDDNWLEVKKGDKIGILPI
SFVELNDPAKELLRLTDKNAIAVAGSDPPVTPAHPVRAVKEGSPNSVATVNNKRHSLTSI
PLTVTTPASALQRRSLDSNTDPDLLASGGQPIAMAAPLTASMTTDLPVAMAVQPKMPANQ
AVAIPPRKIETESTLVPSLNKHENSLSLDQPAVTSRHTGDLMSSSFASNNIEDGATASIY
IALYNYKPQKGDELELIKGDYYSVSEKCLDGWYKGVAVKSNLSGVFPGNYVQSVKTHTSS
NKSSSKPMVTKPKLPPPDPGVSATPTVSPPRPKTSSSEALGRARANERRSAVAQRISQNL
APTTSKGHAAPNPNSPILLTSKTTRYVRAPKSSSPSNGAKPESSKSSSSPVWKHSMSASA
NITPPNVVVGATASQVPAVKEKEKKKDKKKLGGLMDRIASASKLKKPRSSDVEAASLSDS
SISHSRSGSYPSESSPLVPVEPNHKKSGSFDSSSPKSQHRPARPKPLPREKYRCVETYPA
QSEIELDLKIGDVIYVHKKRDDGWFKGTLQRSGKTGLFPGSFVEKVS
NT seq 2304 nt   +upstreamnt  +downstreamnt
atggatgaacaggcactgaatgagttactggagtgttcagtatgtctagaccaactagat
gacaccagtaaagtgcttccttgtcaacatacattttgtaaacggtgcttggaggaaata
gtcagtacaaaacatgagctccgctgtccagagtgccgctttctggttgagatgcgggtg
gaagacctgccatccaatattctgctaatccgtcttctggagggcttgaaatctcagact
cgtataggtggtacacagggccctgggcgtagaagagagctaggttcaccaggggctagt
aaggcagacaacccaaatcaggcagtagcagcttttgctagacaacaacaacagagacag
gctagcaccagcaacagaccttgtgctaaagctttatttacttacgatgctaaagaagca
ggggatctgtcatttaaaaaaggagatgttgtgtatctatggaaacaagtagatgaaaat
tggtttcagggagagctaaatggacaacatggcttctttccagttaattatgttcaggtt
ataacagcattaccagaaaaaatacctcaatgcaaaggactgtatgattttattgtggat
gatgataaagaaggagattgtctgccatttaaaaaggatgaaactatgactgttatacga
agagtagatgataactggttagaagtgaagaaaggtgataagattggtattttacctatt
tcatttgtcgagttaaatgacccagccaaggaactcttacgattaacagataaaaatgca
atagcagtagctggatctgacccgcctgttaccccagctcacccagtgagagcagtgaaa
gagggctctcctaactctgtagccacagtgaacaacaaacgtcattcactcacttccatt
ccccttacagtcaccactcctgccagtgctttacagcgacgctctttagatagtaatact
gaccctgaccttttggctagtggaggtcagccaattgccatggcagcaccattgacagct
tccatgacgacagatttgcctgttgccatggcagtgcaaccaaaaatgccagccaatcag
gctgttgcaattcctcccagaaaaattgaaacagaatccacattggtgccttccttgaac
aaacatgagaactccctatcgttagatcagccagctgtgacatcacgtcatactggtgat
ttgatgtcatcaagttttgccagcaacaatatagaagatggtgcaacagcttccatatat
atagcattgtacaactataaacctcagaagggagatgagttggagctaatcaagggagat
tactactctgtatcagagaaatgccttgatggctggtataaaggtgtagctgtaaaatct
aacctctcaggcgtgttcccaggaaattatgtacagtctgtaaagactcatacaagttca
aataagtcatcgagcaagccaatggtaacaaaaccaaaactgcctccacctgatccaggt
gtatcagccactccaactgtcagtccacctagaccgaaaaccagcagctctgaagcactt
ggcagggcacgggcaaatgaaagaaggtcagcagtggctcaaaggatttctcagaattta
gcaccaaccactagcaaaggtcatgcagcaccaaaccccaatagtccaatactccttacg
tccaaaacaacacgatatgtccgagccccaaaatcatcaagtccaagcaacggtgctaaa
cctgaaagcagcaaaagttcaagcagtcccgtgtggaaacattctatgtcagcaagtgct
aatatcacaccacctaatgttgttgtcggagccacagccagtcaagttcctgctgtcaaa
gagaaagagaagaaaaaggataagaaaaaattgggtggtttgatggataggatagcatca
gcaagtaaactgaagaaaccaagatcctctgatgtagaagctgcctctcttagtgactca
agtatttcacacagcagatcaggatcatacccctctgagagttcaccccttgtacctgtg
gagcccaatcataaaaagtccggatcatttgactcatcttcacctaaatcacaacatcgg
cctgccaggccaaaaccccttcctagagaaaaatacagatgtgtagaaacctaccctgca
caaagtgaaattgagctggatctcaagataggcgatgttatttatgtacacaagaagcgc
gatgatggatggtttaaaggtacacttcaacgttccggtaaaaccggactgtttccaggt
agttttgtagagaaagtgtcttga

DBGET integrated database retrieval system