Ruditapes philippinarum (Manila clam): 132738451
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Entry
132738451 CDS
T09557
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rphi03009
]
132738451
Ribosome biogenesis [BR:
rphi03009
]
Eukaryotic type
90S particles
Other 90S particles
132738451
Pre-60S particles
Other pre-60S particles
132738451
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
I-TevI_ZnF
bcl-2I13
Motif
Other DBs
NCBI-GeneID:
132738451
NCBI-ProteinID:
XP_060581938
LinkDB
All DBs
Position
Unknown
AA seq
1134 aa
AA seq
DB search
MYIKLNQNVIFFRVPVPVLRNKFSEVSKCLLDLMGQYADEDATSLLKSLITSLAFVLRSQ
ERAVWNNSSTQQIYKGLLTFISHKKPKIRRTAQQGVCIVLKGSLFMLQDNAPSHHPAAAM
TAKHCIQVIEATGGMGEAIDTLHTLSLLKQVLPVFPQNSVKTVCETILKVMTLSNVMVTA
SSMQVLHSLFQAKPKPETLPAELNAQIITALYDYQPSENDVQPTQAWLVVMETAHVNLSS
LDGKLCISHLPRLFSAGMVCLLSVKPEITQAAAKSLKCVISSCIAPLAESLAPQLNTEAG
NTSIHKIIKAIESGLGYQFHASWGLVLQMFAVLYQSLGKQSPAAFTKSLSTIAELRDSVR
FPYKGELDHAVGLAVKTMGPRTVLSAIPLQITGQSDDLDFPRSWLLPVIRDNVQETDLSF
FTSYFLPLAAKLRQRALELSDQQNIVASKTYEALQLQIWSMLPGFCTRPTDLAQSFKGIA
KVLGTAISEREDLRMDVMASLRKLINQSITNDDAKAELSRFSKNFLPILFNLYTTDPVRD
KDPSKLAVLETVKSYLQITDKQAVATYCSKCRERLTEENITAYKRHALHDLLIGFLPYLV
ETELLNVYQLAIEHLQDTDKSIQKKCYRILEEICSGKSVETRQFVIENLASIQTSLLSSL
SASSPSSKAPRLRCLVNIFQLLDKRQDDFLLAVVPEAILCTKEVAERARAASYNLLVEMG
QAAKRWSDNNDNGVLEEYFKMVMAGFAGSPQMISATLLALTRIMYQFKAEISSGMLESII
DSVCLLLRSKSREVVQSALAFFKVTVSVYPVTTLAQYLKSIMESLTSMKEDCHHHFRFKA
KEVYTKLIKKFSYETIYNMATDSIRKQLVNIRKTLERSKKKRRGDEGSDSDDEQEHFNTQ
VESIDELLKDSDSEPEEAEKDKRPKLKAKRSMKGNQETGKAWLHEGGDDDITDFMDTSAA
KKVMATKPVEKKEKKMDSGFKTAPDGRLIITESSDDEGGNSEDEDIDELLEALEKGRDSG
KIKQTRKRKIEDLGGSDDETSSPPKYRAGGGGIHRPLNKQDKPARKPQFGSEYKSKKGGG
DVKKVGKHDPYAYVPLDFTSLNKRKQAKMKGQFKNLVRGAKKGAAKGKKAKKRS
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgtacataaaattgaatcagaatgtaatatttttcagagtaccagttccggtattgagg
aataaattttctgaggtttcaaaatgtttgcttgatttgatgggtcagtatgctgatgaa
gatgctacttctcttcttaaatctttgattacatcgttggcatttgtgttacgatcacaa
gaacgtgctgtatggaacaactcctccacacaacaaatctacaagggacttcttacattc
atatctcacaagaaaccaaagataaggagaacagcacagcaaggtgtgtgtattgtatta
aagggcagtttatttatgctacaagacaatgccccgtcacatcacccagctgcagccatg
acagccaaacattgtatacaagtcattgaggccacaggaggtatgggagaggctatagat
acgttacatacattatccttgttgaaacaagttcttcctgtgtttcctcagaacagtgtg
aaaactgtgtgtgaaactatactcaaggttatgacccttagcaatgtgatggtaacggcc
agcagtatgcaggtgttgcacagtttgttccaggcaaaacctaaacccgaaaccctacca
gctgagctcaatgcacaaattataacagcattgtatgattaccagccatcagaaaatgat
gtccaaccaacacaagcttggctagttgtcatggaaacagcacatgtaaatttatcaagt
ttggatgggaaactttgtataagtcatttaccacgactattctccgctggaatggtgtgt
ttattgtcagtaaaaccagaaattacacaagctgctgctaaatcattgaagtgtgtgata
agcagttgtattgccccattagccgagagtttagcaccacaattaaatacagaggcaggt
aatacatctatacataagataataaaggcaatagagagtggacttggatatcagtttcat
gcctcatggggacttgtacttcaaatgtttgctgtattatatcagagtttaggcaaacag
tcacctgcagcatttaccaagagtttgtcaacaatagctgaactaagagacagtgtaaga
tttccatacaaaggagaacttgaccatgctgtgggccttgctgttaaaacaatgggtcct
cggacagtgcttagtgcaatacctctacagattacagggcaaagtgatgatctagatttt
cccaggagttggttattacctgtaatcagagacaatgttcaagaaacagatcttagcttt
tttacatcatatttcctaccactagcagcaaaactcagacaaagagcattagagttgtct
gaccagcagaatatagtagcatcaaaaacgtatgaggcgttacagttacagatctggtcc
atgttgcctggtttttgtactcgacctacagatcttgctcagtcatttaaaggtatagct
aaagtattaggtacagctataagtgagagagaagatctgagaatggatgttatggcttca
ttaaggaaacttataaaccagagcatcaccaatgatgatgctaaggcagaattatctagg
ttttctaagaattttctgcctattctgttcaacttgtacacaacagaccctgtccgtgac
aaagatccatcaaaacttgccgtactagaaacagtgaaatcttacctgcaaatcactgat
aaacaggctgtggccacatattgtagtaaatgtagggaaagattaacagaagaaaatatc
acagcatataaaagacatgcattacatgatttactgataggatttttaccgtatctggtt
gagacagaattgttgaatgtttaccagttagctattgaacatttacaggatacagataaa
tccatacagaagaaatgttaccgtatactagaggagatatgttccggaaagtctgttgag
acaagacagtttgtgatagaaaacctcgccagtatacaaacatcactgttatcctcactg
tctgcttcaagtccatcttccaaagctcctagattgagatgtcttgtgaatatttttcaa
ttactggacaaaagacaagacgatttcctgctagctgttgtaccagaggctatactgtgt
actaaagaggtggcagagagggccagggcagcttcatataatctcctagttgagatggga
caagctgctaaacgttggtcagataataatgataatggtgttttagaggaatatttcaag
atggttatggcaggatttgcaggctccccacaaatgattagtgcaacactacttgcttta
acaagaatcatgtaccagtttaaagctgagatatcaagtggaatgttggaatcaattata
gacagtgtatgcttattattgaggtcaaagtcacgtgaggttgtacaaagtgctctcgca
ttttttaaggtcacagtttcagtgtatccagtcactacactggcacagtatcttaaatct
ataatggagagtttaacaagtatgaaagaagattgtcaccatcatttcagatttaaagct
aaggaagtttataccaagctcattaagaagtttagttatgagacaatctacaacatggca
acagacagtatacgcaaacagcttgtaaatatacgtaaaacactggaacgatcaaagaag
aagaggcgaggtgatgaaggtagtgacagtgacgatgaacaggagcatttcaatacacaa
gttgagagtattgatgagcttctgaaagattcagattcagaaccagaagaagctgagaaa
gataaaaggccaaaattgaaggccaagagatctatgaaaggtaaccaagagacagggaag
gcgtggctacatgaaggtggagatgatgacatcactgattttatggacacgtctgctgca
aagaaagtcatggctacaaagccagtagagaagaaagaaaagaagatggattctggattt
aagacagcacctgatggtagacttattataacagaatccagtgatgatgaaggagggaac
agcgaggatgaagatatagatgagttactggaagcactagagaagggacgtgactctgga
aagataaagcaaaccaggaaaagaaagatagaagatcttggcggatcagatgatgagacc
tccagtccacctaaatatagagctggaggtggtggtatacacagacctctcaacaaacaa
gacaaaccagctagaaaaccacaatttggtagtgaatacaagtcaaagaagggtggtgga
gatgtgaagaaagttggtaaacatgatccatatgcctatgtaccactagatttcacaagt
cttaacaaaaggaaacaagcaaagatgaagggtcagtttaagaatctggtaagaggagca
aagaaaggggctgccaaagggaagaaagcaaagaagagatcttga
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integrated database retrieval system