Ruditapes philippinarum (Manila clam): 132738502
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Entry
132738502 CDS
T09557
Name
(RefSeq) ran GTPase-activating protein 1-like
KO
K14319
Ran GTPase-activating protein 1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132738502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132738502
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
132738502
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
LRR_8
LRR_4
DUF4872
Motif
Other DBs
NCBI-GeneID:
132738502
NCBI-ProteinID:
XP_060581988
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MASDDIADVTKKLEGTKVDEKNLLSFKGKGLKLNKPEDAKEVVEAIEQCSTMTALSMEGN
TLGVEAAESIAQALKKHPEFERALWSDMFTGRLKTEIPQALKYLGAAMIEANAQLVELDL
SDNAFGPNGVTGIVDLLKSKTCYTLKELRLNNNGLGTTGGKMLADCLMDCYNSSKAAGTP
LALEVFISGRGRLENEGSTALSEVFKLMGSLREVQMPQNGINHQGISALSQAFEHNPNLR
ILNLNDNTFTVKGAKSMAKVLPKLQNLEVINFGDCLIRSEGAKVIARSIQDGHKKLKELI
LSGNEINKQGASVVAESVENKDNLTLLDLDSNQLGEEGVELVQATLEAIGKQDILGSLSG
DEGSDEEDIEDDYDESYEEKAQEDTEGDHVDDPQLQVRGTALSPKQSVNVKEFLSFPSPT
KLHSIGGDLSASLRQELGNDIKDIDKTVGTLIRISTVVTEEDKKSCETVCQCADNILEEA
FKEDSNVGSLFANAYLVYIGLLKGEDKKYRPPSDITGPLIVLEHIVKQTYFPHQAKKIIS
AFMDKPHPLLDKSFAIRGKLLQALFS
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagatgacattgcagatgtcactaagaaactagaagggacaaaggttgatgaa
aaaaatctacttagtttcaaaggaaagggactgaaattaaataaaccagaagatgctaaa
gaagttgtagaagcaatagaacaatgttccacgatgacggctctcagtatggaggggaac
actctaggagtggaagcagcagagagtatagctcaagctctgaaaaaacatccagaattt
gagagagcactgtggagtgatatgttcacaggtagactaaagactgaaataccacaagct
ttgaaatatttaggagctgctatgatagaagctaatgcacagttggtggaacttgacctt
agtgataatgcatttggaccaaatggggtcaccggtattgtagatcttctcaaaagtaaa
acatgttatacactaaaggaacttagactcaataacaatggacttggtaccactggagga
aagatgttagctgattgtttgatggactgctacaactctagtaaagctgcagggactccc
ttagcgctggaagtatttatctcagggagagggaggctggaaaatgaggggtcaacagct
ctctctgaagtcttcaagctgatgggatcattgagagaagtacagatgccacagaatggt
attaatcaccagggaatatcagctctgtctcaagcgtttgaacataatccaaatcttaga
atactcaaccttaatgataacacattcacagtgaaaggggcaaaatctatggcaaaagtg
ctaccaaagttacagaatttagaggtgatcaattttggtgattgtttaatcagatcagaa
ggtgcaaaagttatagctagatcaatacaagatggacataaaaaattaaaggaattaatt
ctaagtggaaatgaaatcaataaacaaggagccagtgttgtagcagaatcagtagagaac
aaggacaatcttacactgctagaccttgactcaaatcaacttggagaggaaggtgttgaa
cttgtacaagctacattagaagcaattggtaaacaagatatattaggctccttaagtggt
gatgagggcagtgatgaggaagatatagaggacgattatgatgaaagctatgaggaaaaa
gcacaggaggatactgagggcgatcatgttgatgaccctcaacttcaagtacgaggaaca
gcactaagtcccaaacagagtgtaaatgtgaaagaattcctgtcatttccatcaccaaca
aaattacacagcataggtggtgatctttctgcatcattgaggcaagaattagggaatgac
attaaagatatagataaaacagttggcaccttgattagaatatctacagttgtaacagaa
gaagacaaaaagtcttgtgaaacagtctgtcagtgtgcagataacatcttagaagaggct
tttaaagaagatagcaatgttgggtctctgtttgcaaatgcataccttgtctatattggt
ttattaaagggtgaggacaagaaataccggccacctagtgatataacaggaccattgata
gtgctggaacatattgtaaaacaaacctacttcccacatcaggcaaagaaaataatttct
gcttttatggataagccacacccactgttggacaaatcatttgcgataagagggaaatta
ttacaagctttgttttcctag
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