Ruditapes philippinarum (Manila clam): 132738568
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Entry
132738568 CDS
T09557
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rphi03009
]
132738568
Enzymes [BR:
rphi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132738568
Ribosome biogenesis [BR:
rphi03009
]
Eukaryotic type
90S particles
Helicases
132738568
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
132738568
NCBI-ProteinID:
XP_060582061
LinkDB
All DBs
Position
Unknown
AA seq
692 aa
AA seq
DB search
MDAYDLFRKLGAGAKFDLKRFRSDAEKLHLVKPVSKVQLPRQDVNTSVDYTAQNTSDKAE
KNENDESDSDQDLDQSSSDSDSDTSQSSSDNDEDSKSGSSSEDEVELQLLGNIKSKGDEQ
GANWQEERKKRKQKRKNTDPAKKTAELKKEQVNHVRNLNRVHAYGTDIPEPAETFEDLRN
TYNIHSRIIQNIENVGYKTPTPIQLQAIPVMLHRRELMACAPTGSGKTAAFIIPILHHLR
EPRNEGIRGLVLAPTRELAKQTYREFQRLSEGIGFRIQYIDKTGSDMKKIRKATKKCDIL
VSTPNRLIYLLKQQPAVISLTSVQWLVVDESDKLFEEGKTGFRDQLATIYKSCDGTNLRR
AMFSATFAYDVEDWCKLNLDNVIQVYVGARNSATKTIEQSLLFCGTESGKLIAIRDIIRK
GIQPPVLVFVQSKERAKELFHELIYDGMNVDVIHADRTQLQRDNVIKSFRAGKIWILICT
ELMGRGIDFKGVNLVINYDFPNSAISYIHRIGRTGRAGRSGKAVTFFTEDDGVYLRSIAN
VMRTAGCPVPDYMLKINQPSRQDRKKLSKAAIKRKKISTVTKYDLQKNKHKRKIIYDTKK
KTLKSQGQGEPNNDSTSNSDGQKVKLGKRTHPDTDNSDAKKRKFEKKQNLVKSIQMKFKG
KKPGHLRHKNKGKSGNKTQGKDKQRKGKAPSD
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggatgcttacgatttgtttagaaaactaggagctggagctaaatttgatcttaaacgc
ttcagatctgatgctgagaaactacatttagtaaagccagtcagtaaagttcagttgcca
cgtcaggatgtcaacacttcagtagattatactgcacaaaatactagtgataaagcagaa
aaaaatgagaatgatgagtcagactcggatcaagacttagatcagtcctctagtgactca
gattcagacacatcacagtcttctagtgataatgatgaagattcaaagtctggttccagt
tctgaagatgaggtagagctccagctacttggaaatataaaatcaaagggtgatgagcag
ggagccaattggcaagaagaaagaaagaaaaggaaacaaaaaagaaaaaatactgaccca
gcaaagaaaacagctgaattaaaaaaggaacaagtaaatcacgtccgtaatttgaaccgt
gtacatgcatatggtacagatattccggagcctgcggagacattcgaggatctgagaaac
acatacaatatacattcacgtataatacagaacatagaaaatgtgggctataaaactcct
acccctatacagctgcaggctataccagtcatgttacatagaagagaattaatggcttgt
gccccgactggttctggtaaaactgctgctttcattatacctatactacatcatctccgg
gaaccaagaaatgagggaatacgaggacttgtattggcaccaacaagagagttagcaaaa
cagacataccgagagtttcagcgtctgtctgagggtatagggtttaggatacagtacatt
gacaagactggaagtgatatgaaaaaaattagaaaagctaccaaaaaatgtgatattctg
gtttctaccccaaatagactgatatatcttctcaaacaacaacctgcagtcatttccctc
acaagtgtgcagtggttagtggtagatgaatcggacaaattatttgaagaaggaaagaca
ggtttcagggatcagcttgccactatatacaagtcatgtgatggaactaaccttagaaga
gcaatgttcagtgctacatttgcgtatgatgttgaggactggtgtaaacttaaccttgac
aatgtaatacaggtgtatgtaggtgcaaggaattctgcaacaaagacaatagagcagtca
ttattattttgtggaacagaatcaggcaaacttatagctatcagggatattatacgaaag
ggtatacagcctccagtgttagtgtttgtacagtctaaagaaagagcgaaggaattgttc
catgagttgatctatgatggtatgaatgtagatgtgatacacgcagatagaacacagtta
cagagagataatgtaataaaaagtttccgagctggaaagatctggattttaatttgcacg
gagctgatgggtcgtggtattgattttaaaggagtgaatcttgtgatcaattacgatttt
cctaacagtgcaatcagctacattcacaggataggtaggacaggtcgagctgggagatct
ggtaaagctgttaccttctttacagaggatgatggtgtttatttaagaagtatagccaat
gtaatgagaactgctggatgcccagtaccagattatatgcttaaaattaatcaaccatca
aggcaagatagaaagaaactgtcaaaagctgcaataaaaaggaagaaaatttctacagtg
acaaaatatgacctacagaagaataaacataaaaggaaaattatatatgatacaaagaaa
aagacattaaaatcacagggacaaggggaacctaacaatgactctacttctaacagtgat
ggacagaaagtgaaactaggaaaacgaacacatcctgacactgataatagtgatgcaaag
aaaagaaaatttgagaaaaagcaaaaccttgtgaaatcaattcagatgaaatttaaaggt
aaaaagccagggcatttaagacataaaaataaaggaaagtcagggaataaaactcaagga
aaagataaacagagaaaaggaaaagcaccaagtgattga
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