Ruditapes philippinarum (Manila clam): 132738767
Help
Entry
132738767 CDS
T09557
Name
(RefSeq) tyrosine--tRNA ligase, cytoplasmic-like
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
132738767
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rphi01007
]
132738767
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rphi03016
]
132738767
03029 Mitochondrial biogenesis [BR:
rphi03029
]
132738767
Enzymes [BR:
rphi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
132738767
Amino acid related enzymes [BR:
rphi01007
]
Aminoacyl-tRNA synthetase
Class I (A)
132738767
Transfer RNA biogenesis [BR:
rphi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
132738767
Prokaryotic type
132738767
Mitochondrial biogenesis [BR:
rphi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
132738767
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1b
tRNA_bind
Motif
Other DBs
NCBI-GeneID:
132738767
NCBI-ProteinID:
XP_060582343
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MCKISDFLRAGCEVTILFADLHAYLDNMKAPWELLQLRVQYYEHVIKAMLKSIGVPLEKL
KFVQGTDFQLSREYTLDVYKLSSLVTEHDAKKAGAEVVKQVDHPLLSGLLYPGLQALDEE
YLKVDAQFGGVDQRKIFTFAEKYMPQLGYTKRAHFMNPMVPGLTGGKMSSSEEDSKIDLL
DSEAQVKKKLKKAFCEPGNTAENGVLAFCKSVLFPLSKTGEFKIERAEENGGNLLYTKYE
DLEKAFASQELHPADLKGAVEVYLNTLLEPIRQEFSTPELKKLTSSAYPVQKKKGGKPAA
AGANADAELSPSRLDFRVGKILKVEKHPDADSLFVETVDLGEPETRTVVSGLVGLYPEEK
LQDRLGVFLCNLKPNKMRGVTSSAMLMCASVDDPRAVEPLNPPEGSAPGDRIYFDGHHSD
SPDEQLNPKKKVWEKLQVDMRTNGDCIAEWQGNNMMSKLGLVKCDTLKSAPIK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaaaatatctgacttccttagagctggttgtgaggtgactatactctttgcggat
ctccatgcctacctagacaatatgaaggcaccatgggagttgctacaacttcgtgtacag
tactatgaacatgtgatcaaagctatgctcaaatctataggtgtgccactagaaaaactg
aagtttgtccaaggaactgacttccagttgagtagggaatacacgctggatgtgtacaaa
ttgtcgtcattggttacagaacatgatgcaaagaaagctggagcggaagttgttaaacaa
gtggaccatcctttgttaagtggactgctgtaccctggtttacaggctttagatgaagaa
tacctgaaagttgatgctcaatttggtggggtagatcagagaaaaatcttcacatttgca
gaaaaatacatgccacagcttggatacactaaaagagctcattttatgaatcctatggtt
cctggattgactgggggaaagatgagctcttcagaagaagattctaaaatagatcttcta
gattcagaggctcaggtgaagaagaagttaaagaaggcattctgtgaaccaggaaataca
gctgaaaatggagtcttagctttctgtaaatctgtactcttccctctatcgaaaactggg
gagtttaaaattgaaagagcagaagaaaatggaggaaatctactttacaccaaatatgag
gacctggaaaaagcctttgctagtcaggaattacatccagcagatctgaagggagctgta
gaggtgtacctaaatactttacttgaacccatcaggcaggagttcagcacacctgaactg
aaaaaactcacctcatcagcttatcctgtacaaaagaaaaagggaggtaagcctgctgca
gcgggtgccaatgcagatgctgaattgtctccctctagattagattttcgagtagggaaa
atattgaaagttgaaaagcatcctgatgctgattccctgtttgtagagactgtagatttg
ggtgaaccagaaaccaggactgttgtgagtggactggttggcctatatcctgaggaaaaa
ctacaagatagactgggtgtcttcttgtgcaaccttaaaccaaacaaaatgaggggtgtg
acctcaagtgcaatgttgatgtgtgcctctgtggatgaccctagggcagttgagccgttg
aacccaccagagggcagtgcaccaggagatagaatttattttgatggccaccactcggat
agtcctgatgaacagttgaacccaaagaaaaaagtttgggaaaaattacaggttgacatg
agaacaaatggtgattgtatagcagaatggcaaggcaataatatgatgtcaaaactagga
cttgttaaatgtgacactttaaaatcggcaccaattaaataa
DBGET
integrated database retrieval system
