Ruditapes philippinarum (Manila clam): 132738768
Help
Entry
132738768 CDS
T09557
Name
(RefSeq) fanconi-associated nuclease 1-like
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
132738768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rphi03400
]
132738768
Enzymes [BR:
rphi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
132738768
DNA repair and recombination proteins [BR:
rphi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
132738768
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
FAN1_HTH
Fan1_SAP
DUF7393
Motif
Other DBs
NCBI-GeneID:
132738768
NCBI-ProteinID:
XP_060582344
LinkDB
All DBs
Position
Unknown
AA seq
1094 aa
AA seq
DB search
MSNQASKKRKLSLKRTNGSNQHDQRRNTIISMFQKQNDKQAVEEQTKESGSEGDVVITNV
IGLNADTCQNVSESASSSVAHHKSQCTDTTKRLSLSGRKKRKLPDTKDRESASDSDFEVR
KSNKKEKRKTALSRTVSAQESRPQGGHYRLRKRNTVPVVEVSDSDKDNEKEDNDKDNEEK
ARTEKVNKMSDQATSNVDSRKHTDDIEKKRESSDSSMEDVVVVETPESKSKYFSNSGKRK
LTNSTEKIKLSLKKSRGGKEAEQESVKSKSEESMNFKIKSDKFECDMERSSSDTACLMKK
KISKDKSRNQINKLSNDNPSNLENKSFLNDSKKGKNNHDSQKSNVNSILMQKACGSNEKD
TESLGSSKDGYDKNEVIGKHKKGLVNGKSISKPSVKSKSGLIVNETTDSNKVDTDKEIVN
IDDKDNADEDVYEDVREDGEKVEYRVPYYLENFKKILESVLDDKENARLFDEMDMKYITT
FNNLDEASQKLYVRLFSRKLTWLPMTKVNYPEISDDIPKLIDGLVEIDLLYSGTELSDLP
IVLKILSAPDLKTLAKTFHINSQGMTKASIIEELLKKGKKNSISAMFKGGSTGTMEKTIL
NRAKSYLGKVCRLKDEPRAVFIRLLMLFSLYNTNFDEESGGGGQNQLFQMLMVNIGRVVY
PSYTVNRDRSVFQDRDALVRFETALQFEMDIQGMTERNKWVQANNIYKQAREVGKHICKD
KQFMNWDSGLPQFLRLYTAGSVYTRIDNQGVEILQRLKLYKEAVDLLEELLAQDLYCVQY
RGHWYERLALNLEAHLKSVQKSFNVLKRGLSDSTVRTGRRLALYERARKICEAPKSKYAD
RISEFEPQAVLPTPEVYIEGMVVSDATAVGMKYKFVMQGDSDSVTFCGVEELVLEHYKQN
GYPEGLHAEGSIVSNLFVLLFWDIMYMDVPNVFHGPFQSCPLDIATQDFYLNRQQVTEER
LEWLKNASIEELNTEVGRVWSEHEGKMCSGISWDKFSGPDTHQNLISCMGGPIIAGILER
YVKDPRHTRSGFPDLTLWNTETKQFKICEVKGPNDRLSYKQILWIDYLQKLGVDAEVCYV
KAVGSKKLKPVTKN
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaccaggcatctaaaaagaggaagctatcactgaaaaggactaatggatcaaac
caacatgatcaaagaaggaataccatcatttctatgtttcaaaaacagaatgataaacag
gctgtagaagaacagaccaaagagtctggaagtgaaggagatgtagttataacaaatgta
ataggccttaatgcagatacttgtcaaaatgtttcagaatcagcttcaagttctgtagct
catcataaaagtcaatgcactgacaccacaaagaggttaagtttgtcaggaagaaaaaag
cggaagctcccagatacaaaagatcgtgaaagtgcatcagattctgactttgaagtaagg
aaatcaaataaaaaggaaaagagaaaaactgctctttctagaactgtatctgctcaagag
tcaagacctcagggagggcattatagactgagaaaaagaaacactgtaccagttgtagaa
gttagtgatagtgataaagataatgagaaagaggataatgataaagataatgaggagaaa
gctaggactgaaaaagtcaataaaatgtctgatcaggctacatctaatgttgatagtaga
aaacatactgacgatattgaaaagaaaagggaaagtagtgatagttctatggaagatgtt
gttgttgtggagacacctgaatccaagagtaaatactttagcaattcaggaaagagaaag
ttaacaaattctactgaaaaaataaaactttcattgaagaaatctagaggtggaaaagaa
gcagaacaagaaagtgtgaaatccaaaagtgaagaaagtatgaatttcaaaataaaatct
gacaaatttgaatgtgatatggagagatcaagttctgacacagcttgtctaatgaaaaag
aaaatttcaaaagataagtcaagaaatcaaataaataaattgtcaaatgataatccttca
aatcttgaaaataaatcatttttgaatgacagtaagaagggtaaaaataatcatgattca
caaaaatctaatgtaaattctatcttgatgcaaaaagcatgtggatcaaatgagaaagac
actgaaagccttggtagttctaaagatggatatgataaaaatgaagttatcggtaagcat
aaaaagggtttagtgaatggtaagtcaatttcaaaaccttctgtaaaatcaaagagtggt
ttgattgttaatgaaactactgatagtaataaagttgatactgataaagaaatagtcaac
attgatgacaaggataatgctgatgaagatgtttatgaagatgtgagagaagatggtgaa
aaagtagagtacagggtaccatactacctagaaaactttaagaaaatattggaaagtgtc
ttggatgataaagagaatgcaaggttgtttgatgaaatggacatgaagtacattactact
tttaataatttagacgaggcaagtcagaaactgtatgtgaggttgttctctcggaaatta
acttggcttcctatgacgaaagtgaactacccagagataagtgatgatataccaaagctt
attgatggtcttgtagagattgatcttctctattcagggacagaattatcagacctgcca
atagttttaaagatattatcagcgccagatttaaagacattggcaaaaacattccacatt
aacagtcagggtatgacaaaagctagcatcattgaagagctgttgaagaaaggcaagaaa
aactcaatttctgccatgtttaaagggggttccacaggaacaatggaaaaaacaatattg
aacagagccaagagttacctcggtaaagtgtgtagactgaaagatgaaccaagggctgtg
tttatacgattgttgatgttgttttccttatacaataccaactttgatgaagaaagtggt
ggcggtggacagaatcaactctttcaaatgctcatggttaatataggtagagttgtctac
ccttcttacacggtcaatagagacaggtctgtgtttcaagatagggatgctcttgtgagg
tttgagactgcccttcagtttgagatggacattcagggtatgactgagagaaacaagtgg
gtacaagcaaacaatatatataaacaagctagagaagttggcaagcatatttgcaaggac
aaacaatttatgaactgggacagtggtttacctcagtttttacgactgtatacagctgga
agtgtgtacacacgcatagacaaccaaggtgtggagattttacagagactgaaactgtac
aaggaagctgttgacctcctagaagagctgctagcccaggacttgtactgtgtccagtat
cgaggtcactggtatgagagactggctcttaatttagaagctcatctgaagtctgtacaa
aagagcttcaatgtattgaagcgaggtttatcagattctacagtacgaactggaagacga
ctagctctgtatgagagggcacgcaaaatttgcgaggccccgaagtccaagtatgctgat
agaatcagtgagtttgaaccccaggcagtccttccaacacctgaggtttatatagaaggt
atggttgtatcagatgctacagctgtaggtatgaagtataagtttgtcatgcagggggac
tcagactcggtcacattctgtggtgttgaggaattagtgcttgaacattacaaacaaaat
ggctaccctgaaggtcttcatgcggagggatctatagttagtaacctgtttgttttgtta
ttctgggacatcatgtacatggatgttccaaatgtgttccatggaccattccagtcctgt
cctcttgatatagccacacaagatttctacctcaacaggcaacaggttacagaagaaaga
ctggaatggctgaaaaatgcttccatagaggagttaaatacagaagttggccgtgtttgg
agtgaacatgaaggtaagatgtgttctgggatcagctgggataaattctctggacctgac
actcaccaaaacctcattagctgtatgggaggacctattattgctggaattttagaaaga
tatgtgaaagatccaaggcatacaagaagtggattccctgatctgactctatggaacaca
gaaaccaaacaatttaagatctgtgaggtgaagggtcccaatgacagactgtcatataaa
cagatattatggatagactatttacagaaactaggagtagatgcggaggtgtgctatgtt
aaagctgtaggatcaaagaagctgaaaccagttacgaaaaactga
DBGET
integrated database retrieval system
