Ruditapes philippinarum (Manila clam): 132738780
Help
Entry
132738780 CDS
T09557
Name
(RefSeq) valine--tRNA ligase-like
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
132738780
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rphi01007
]
132738780
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rphi03016
]
132738780
Enzymes [BR:
rphi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
132738780
Amino acid related enzymes [BR:
rphi01007
]
Aminoacyl-tRNA synthetase
Class I (U)
132738780
Transfer RNA biogenesis [BR:
rphi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
132738780
Prokaryotic type
132738780
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1_2
tRNA-synt_1g
tRNA-synt_1e
Tropomyosin
tRNA-synt_1b
XhlA
Motif
Other DBs
NCBI-GeneID:
132738780
NCBI-ProteinID:
XP_060582357
LinkDB
All DBs
Position
Unknown
AA seq
1023 aa
AA seq
DB search
MSASWSNMKVIYDRIGLKLYKTIAFKDIYHIVKFRSYCATSAPQSADSGKKQYIATDYTC
PTAPGDKKDTTCELPAAYNPQYVEAAWYEWWMKQGYFSPKEGVDKSKKFVICLPPPNVTG
TLHLGHALTCAVQDAIVRWHRMRGYETLWIPGCDHAGIATQVVVEKQLWKEEKKTRHDVG
REEFLRRVWKWKESKGDTIYEQMKKMGASLDWERACFTMDKKMSAAVAEAFVRLHDEGLI
YRCDRLVNWSCELKSAISDIEVENVDVKGPTRLYVPGYSKPQVFGEMASFDYPVLNSDEK
ITVSTTRLETMLGDTAVAVHPEDPRYKHLHGQFVQHPLDDRRIPIICDDYVDMNFGTGAV
KITPAHDNNDYNISVRHKLPLINIINDTGEMENVPEAFIGLKRFDARRAVAKALDKKGLY
KGRKPHSMVLPICSRSKDVIEPILKAQWYINCEDMALNAVKVVENGDLTFTPDYYKKIWY
EFLKDEKSRDWCISRQIWWGHRIPAYKVIQKTNQRTSDELWVSAHTEHDAYIKAEKLFSL
NPNEFTLQQDEDVLDTWFSSALFPFSVHGWPNQTTDLLKFYPSNLLETGSDIIFYWVARM
VMLGQKMTGQLPFSKVLLHGILRDAQGRKMSKSLGNVIDPMDVVHGISLNDLNKQVEQSN
LDPKEVEVAKKGQQKDFPEGIPACGTDALRFALCSYNFKDPEINMNISHVQSYRNFCNKI
WQGYRFVADKIGDEYKSTIDLKTHTIKSPVNRWMLSRLSHLVLKCEENFASYDLHHVTQS
LYSFWFTDFCDVYLEFSKQVFQSEDDDSKSTVQEILYLCTSTYMRAISPFMPYLSEELYQ
RLEPGADSVCVAQYPATDNYRWYNEELDREMEVVRDIRRVTLSLAQTFNLTKKHAEVYIQ
SSPAHCDMFRQYMTVFNALLRVKSLQLVSDGGSIPLGCIHREITPEITVHLKLQGSIDHS
AVLEKFEKKVASLQKKLDGIEKKVGKAADKDKSAYKKIDSYRSELEVFQNYIDTLKSFDE
NGR
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcctcctggagcaacatgaaagtgatttatgatagaatcggcttaaaattgtac
aaaactatagcatttaaagatatctaccacattgttaaattccgaagttattgtgcaaca
agtgctccacaaagtgctgatagtggtaagaaacaatatatagccacagattacacatgt
cctactgcaccaggggataagaaagacacaacatgtgaactaccagcagcttataacccc
cagtatgtggaggcagcatggtatgaatggtggatgaagcaaggttacttctcccctaaa
gaaggagtggataaatcaaagaagtttgttatatgcctacctccaccaaatgtaacggga
actcttcatcttggccacgctcttacatgtgctgtacaagatgctattgttagatggcat
cgtatgagggggtatgagactctatggatacctggttgtgatcatgctgggatagctaca
caagtagttgtggagaaacagctgtggaaggaggagaaaaagacgaggcacgacgttggc
agagaagaatttctacgacgtgtttggaaatggaaagagagtaaaggtgataccatatat
gaacaaatgaagaaaatgggggcatctctagattgggaaagagcttgttttactatggac
aagaaaatgagtgcagctgtcgctgaagcatttgtgagactacatgatgagggtctgata
tacagatgtgatagactagtgaactggtcatgtgaactgaagtcagctatttctgatata
gaggtagagaatgtcgatgtaaaagggccgactagattatatgttcctggttacagtaag
cctcaagtgtttggagagatggcttcttttgattacccagttcttaattcagatgagaag
atcacagtgtcaacaactcgtttggagacaatgctgggtgatacagctgtggccgtccac
ccggaggaccctcggtataaacatctgcacggacagtttgtccagcatccactagatgat
agacgtattcctataatatgtgatgattatgtggacatgaactttggcacaggtgcagtc
aagatcacgccagcacatgacaataatgattataacatcagtgtccgtcataaactacct
ttaataaacattatcaatgacacaggggaaatggaaaacgttcccgaggcatttataggg
ctgaagagatttgatgcaaggagagcagttgctaaggcgttggacaagaaaggattatat
aaagggaggaaacctcattcaatggtgttacctatatgtagtagatctaaagatgtgatt
gaaccaatattaaaggcacagtggtatataaattgtgaagatatggcactaaatgcagtg
aaagtagtagagaatggggatttgaccttcacacctgactattataaaaagatttggtat
gaattcctgaaagatgaaaagtcaagggactggtgtatatcacgacagatatggtggggg
cataggatacctgcttacaaagttattcagaaaactaatcagagaacaagtgatgagtta
tgggtcagtgcccacacagaacatgatgcctacatcaaagctgagaaactgttttcatta
aatccaaatgagttcacacttcaacaagatgaagatgtattggacacatggttttcatca
gctttgttcccattctctgtacatggctggccaaatcagacgacagatttattgaagttc
tatcccagcaacctcttagaaacaggaagtgacataatattctattgggttgccaggatg
gtgatgttgggacagaaaatgactggacaacttcccttctcaaaagttttattacatggt
atactgcgagatgcacagggaagaaagatgagtaaatctctgggaaatgttattgatcca
atggatgtggtccatggaatatcattaaatgatttaaacaagcaggtagagcagagtaac
cttgaccccaaagaggtagaggttgctaagaaaggtcagcagaaagattttcctgaaggg
atacctgcctgtggtacagatgccctcagatttgctctatgttcttataactttaaagat
cctgaaattaacatgaacatttctcatgtacaaagttatcgtaatttttgtaacaagatt
tggcaaggatacaggtttgtggcggacaagataggggatgaatacaagtcaacaatagat
cttaagactcacactataaaaagtcctgtcaacagatggatgctaagtcgactaagtcat
ttagtgttaaaatgtgaggaaaacttcgccagctatgatttacaccatgtaacacaatcc
ctttatagtttctggtttacagatttctgtgatgtatatctggaattttcaaaacaagta
ttccagtcggaagatgacgacagtaaatccacggtacaagaaattctctacctatgtact
agcacatatatgcgtgcaataagtccgtttatgccatacttgtcggaggagctataccag
aggcttgaaccaggagctgacagtgtttgtgtggcacagtatccggcaacagataactat
agatggtataatgaagaattagacagggagatggaagtagttagagatatacgtagagtc
acattatctctagcccagacatttaacttgaccaagaaacatgcggaagtatatatacaa
tcaagtcctgcccactgtgatatgtttagacaatatatgactgtgtttaatgcactgtta
agggtgaagtcactacagttggtcagtgatggtggatctataccattaggctgtatacat
agagagataacaccagaaataactgtacatcttaaactacagggctcgattgatcattca
gctgtgttagaaaagtttgagaagaaagtagccagtttacagaagaaacttgatggtata
gagaaaaaagttggaaaggcagctgacaaagataaaagtgcttataaaaagattgattca
tacaggagtgagctcgaggtctttcagaattatatagacactttaaaatcatttgatgaa
aatggaagataa
DBGET
integrated database retrieval system
