Ruditapes philippinarum (Manila clam): 132738831
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Entry
132738831 CDS
T09557
Name
(RefSeq) LOW QUALITY PROTEIN: chitin synthase chs-2-like
KO
K00698
chitin synthase [EC:
2.4.1.16
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00520
Amino sugar and nucleotide sugar metabolism
rphi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
132738831
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rphi01003
]
132738831
Enzymes [BR:
rphi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.16 chitin synthase
132738831
Glycosyltransferases [BR:
rphi01003
]
Polysaccharide
Structural polysaccharide
132738831
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Chitin_synth_2
Glyco_trans_2_3
ChitinSynthase_IV_N
Glycos_transf_2
Glyco_tranf_2_3
Glyco_transf_21
Motif
Other DBs
NCBI-GeneID:
132738831
NCBI-ProteinID:
XP_060582419
LinkDB
All DBs
Position
Unknown
AA seq
1804 aa
AA seq
DB search
MSSAIGSTARDDDGEANDNIRSLTRHVSIADFIERYRGISFSKNSVVSPTHENIVQVLTD
AGLGDVLVNESEVILQHWQELYLQELAEAIDENRQPGLHCVDNPLYITQHDVLCTEEYNC
SGSKLNESQMYDEVLPNVNQSQTGASNWHLKRQQEIRNEGDRSRSTRKTLEQDHVSRASN
NQDLTVSESPFNMTADEHIHAGNERVGDEWMNGEEMIMTSARGQEPGEQTDSGSMVSDWM
EHNAHYANVTGNADNMEHTLIDQAKSDHGSIALDPRWWDRFQMMPREQVSNSATFQTVFK
FFKVVCYIFIMIMVLTSAVVNKICVLIMTSSVTKDPLTESQWPVKTMLLISICFPYSIWF
LVYSGKSVFGSTTWPSLSLLSSVLFIELLHTLGLSLLVFRVLPMLDMLRAFIVLGSIYTV
PAFLKTIFEGRDPNTGLARKCSIFVLNFGAFLIQIGSIVLCEMFQISMSPSEKMGIRNAV
LQDDLSVIVPRPNLGKGFFRNEVLFELPIALVLISVSYWENYVEGEFSIFGKSMNFKNWK
KHLHHARGRLYIFASIWKACWVIAFAVLLQPGFNFNLSYTNPAQQNDTISPRSVRAIQHQ
GQNIFRDTRFTRREVDSDAPNATTIKTHVINFISETTSALVTTEAYTDVTSRAPNVNKSD
PDQNMFYFSPETMQHFEEYGVFYIQIISSTLLAYFGGTACKLCMQMIGFSLPLSLTTPIS
VAVVVLQNIYEFLPTGSFVWIGVENGSNTWILHLAWLGVLWLSELYITSHIWFPGNGRME
KIDRLFITPIRCSIFADQSLILRRRRNDHDTSLTPDTDEDYYDPEIDQYKADDVVPQIYA
CATMWHETRAEMTNLLKSIFRMDIDHSGRYLAQKFYKIRDPDYYEFEAHIFFDDAMELSH
DDLLVPNMFVADLLECIDDSLSSVHERQMSLGPPIRTPTPYGGRLTWRLPGGTRLIAHLK
DKHKIRHKKRWSQVMYMYYLLGYRILAQPENLLTKDMIEGFRSDGELKRVRLTESQLRRR
RKAAHFTRSVIFNYVTDEVHIQAENTYILTLDGDVDFHPDAVRLLVDRLKTNKKVGAACG
RIHPIGSGPLLWYQQFEYAIGHWLQKATEHVFGCVMCAPGCFSLFRGSALMDDNVARTYA
TRATEAGHYVQYDQGEDRWLSTLLLQQGYRIDYCAASDALTHAPETFSEFFNQRRRWGPS
TLANIVDLLGGWKAAISINDNISTLYILYQFCLMVSTILGPATILLMLAGAFVVVFKLTV
IESYCLALIPAIFFIIVCIYAKPSTQMTIASIMSAVYAILMTVVLVGTVGQAIEGGVTSP
NVVFLVMLVLIFFISAIMHPEEFFCVIPGALYFICLPTGYLLLTMYYLCNMNTVSWGTRE
VPKRKTKEQIAEEKRVAEENRKKREERKKGILGWMGLNSFFKDVGEVFKQLRTEASHYEK
SKTDVLLEELIHEIRRSRENKDSDKLTPMRMPEIKPDTEQCNEEPNTDLVTEETKQEEDE
AKSVKNHENSIPVWLQREDADNPGWLQSAICGDGPIKSLNEKESIFWKQIIMKYLYPLNE
DKIHQEKVQHDLKNLRNNVVFGFFMTSALWIALSMQLQILQEDLKDTLFFKIPRWEISDD
LAFEPLGLIFLAFFATILCVQFLGMFIHRWGTMLHMLSITDISCGKTFTEKDKVREIIMK
SMELQKLCNIENEPTPDYEDSLPDYEPTDDEEYYESQSVVTSDSADVSTWSNNPPAYETM
SAAMMHRNGRQDIFNRRGNASGAALRKAFEKRFRNEKQLHRMDADVPINSRMYSMGENDA
ASIV
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgctattggaagcactgcacgggatgatgatggtgaggctaatgataatata
aggtcattaacacgtcacgtgtcaatagctgactttatagaaaggtaccgtggtatctca
ttttctaagaacagtgttgtttcaccgacacacgagaatatcgtgcaggttttgactgac
gctggtctgggagacgtacttgttaacgagagcgaggtaattcttcaacattggcaagaa
ctatatctacaagagttggccgaagcaatagatgaaaatcgtcagccgggccttcattgt
gtggataatccgctttatataactcaacatgatgttctgtgtactgaagaatataactgc
tccggttccaaattgaatgaatctcaaatgtatgacgaagtacttccgaatgttaatcag
agtcaaacaggcgcttcaaattggcatttaaagcgccaacaggaaatcaggaacgaggga
gatcgcagtcgtagtaccagaaaaactctagagcaagatcacgtgagccgcgcgtcaaac
aatcaggatttaacagtaagtgaaagtccattcaatatgacggctgatgaacatatacat
gccggaaatgagagagttggtgacgaatggatgaatggtgaagaaatgatcatgacgtca
gcaagaggacaggaaccaggtgaacaaacagactcgggaagcatggtctctgattggatg
gaacataatgcgcattatgcaaatgtcaccggaaatgccgacaatatggagcacacatta
atcgatcaggcaaaatcagaccatggaagcattgcactagatccacgctggtgggaccgg
tttcagatgatgccacgtgagcaggtgtccaacagcgccacctttcaaactgtgtttaaa
ttctttaaagtcgtctgctatatttttattatgattatggttcttacgtcagcagtcgtc
aacaaaatttgtgttcttataatgacgtcaagcgtgaccaaggacccgttaacagagtct
caatggccagtgaagaccatgttactaatcagtatttgtttcccatactccatctggttt
ctggtgtattctgggaaatctgtttttggcagtacaacatggccgtcgctgtcacttttg
tcatcggttctctttattgaactactgcacacacttggtttgagtctgcttgtctttcgc
gtgctaccaatgttggatatgctcagagcctttatcgttctcggaagtatctacaccgtg
ccagcattcctcaagactatctttgaaggtagagaccctaacacaggcctagcaagaaag
tgttcaatatttgtgctgaattttggagcgtttcttattcaaataggaagcattgtacta
tgtgaaatgtttcaaatttcaatgtcgccatccgaaaaaatgggtatccgaaatgcggtt
ttacaagatgatttatcagtaattgttccacgaccgaatttaggcaagggatttttcaga
aacgaggttttgtttgaactccctatagctctagtattgatatctgtgtcttactgggaa
aattacgtagaaggagagttttctatatttggaaagtcaatgaatttcaaaaactggaag
aaacatttacatcacgctagaggacgcctttacatattcgctagtatttggaaagcttgt
tgggtaatagcatttgcagttctgctacaacctggatttaactttaacctgagctatact
aacccagctcaacaaaatgatacgatttcccctcgttctgtccgtgcaatacaacaccaa
ggtcaaaatatatttcgtgacaccagattcactcgacgtgaagttgacagtgatgctcct
aatgctacaacaatcaagacacacgtaatcaactttatttcggaaacgacttccgctttg
gtcacgactgaagcctacactgacgtcacttcccgggctccaaatgtcaacaaatcagat
cctgatcaaaacatgttctatttttcacctgaaacaatgcaacattttgaagagtatgga
gtcttttatattcagattatatccagtacgttgttagcttatttcgggggcaccgcgtgc
aagctgtgcatgcaaatgataggattttcacttccgttgtcattgacaactccaataagt
gtcgctgttgtcgtgttacaaaacatttatgaatttcttccgactggttccttcgtttgg
attggtgtcgaaaacggaagcaatacgtggattctacacctggcttggttgggcgttctt
tggctttctgagctttatattacgtcacatatttggtttccaggcaacggacgcatggag
aaaatagacagattgtttattaccccaatccgatgtagtatatttgccgaccaatctcta
attctacggcgccgacgtaatgaccatgacacgagcttaactcctgatactgatgaagat
tactacgacccggaaattgatcagtataaagcagacgatgttgtgccacagatctacgca
tgcgcaacaatgtggcacgagacacgggcggaaatgacgaatctgcttaaatcgatattt
cgaatggacatagatcacagtgggagatatttggcacagaagttttacaaaatcagagat
cccgactactacgagtttgaagcgcacatattttttgacgatgcgatggagctatcgcac
gatgaccttttagtaccaaacatgtttgttgctgatttactggaatgtattgacgattct
ctaagttcagttcacgagcgtcagatgtccctaggtccacccattagaacccctacacct
tacggaggccggctgacgtggcgacttcccggtggtacccggcttattgcacacctgaaa
gacaaacataaaattagacataagaaacgatggtcccaggtgatgtacatgtactatctc
cttggataccgtatcttagcacagcctgaaaatttgcttacgaaggacatgatcgaaggc
ttcaggtccgacggagaattgaagagggtccggcttactgaatctcaacttcgccggcgt
cggaaagctgcgcacttcactagaagtgttatttttaattacgtaacagatgaagtccat
attcaggcggaaaacacatatattttgactttagatggcgacgtggactttcaccctgat
gccgtgcgtctgttagttgatagattaaagaccaataagaaagtaggagcggcttgtgga
cgtatacatcccatcggctccggcccactgctgtggtaccaacagttcgagtacgctatc
ggacattggcttcagaaggcaacggaacacgtgttcggctgtgttatgtgcgcacctgga
tgttttagcctctttagaggttctgctctgatggacgataatgtggctcgaacctacgcc
accagggccacagaggccggtcactacgtgcagtatgatcaaggtgaagaccgctggctg
agtactttacttttacaacaaggttaccgtatcgactattgcgcagcctccgacgcattg
acgcatgcgccggaaaccttctctgaattcttcaatcagcggcgtcgctggggcccgagc
acacttgctaacattgtagaccttttaggtggctggaaagcagcaatcagcatcaacgac
aacataagcacgctgtatattctgtatcaattttgtctcatggtatccacaattcttggt
ccagcaacaatcttgttaatgttggcaggagcatttgttgtcgtatttaagttgaccgtg
atagaatcctactgtttagctttgataccggcaatcttctttattatcgtctgcatctac
gccaaaccaagtacacagatgacgattgcatcaattatgagtgcagtgtatgcaatatta
atgactgtagttttagttggaactgtaggccaagctatagaaggcggtgtcaccagtccc
aatgttgtgtttttggtaatgctcgtgctaatattctttatatccgccatcatgcacccg
gaggaattcttctgtgtcattccaggcgctctttattttatatgtcttcctacaggctac
ttgcttttaacaatgtactacctatgtaatatgaacacggtatcatggggaacgcgagag
gtcccaaaacgtaaaacaaaagagcaaattgcggaagaaaaacgtgttgcggaagaaaat
cgcaagaaaagagaagaaaggaaaaagggaatccttggctggatggggttgaattcattc
ttcaaagatgtcggggaagtctttaagcaattaagaacagaagcttctcattatgaaaaa
tcaaaaacagatgttttgctagaggagcttatccacgaaatacgtagaagtagagaaaac
aaagacagtgacaaattaacgccaatgcgcatgcctgaaataaaaccggataccgaacag
tgtaatgaagagccgaatacagatctggtaacagaagagaccaaacaagaggaggatgag
gcaaagtctgtaaaaaatcatgaaaacagcatacctgtttggttacaacgtgaagatgcc
gacaatcctggttggctacaatctgctatatgcggggatggtccaattaaaagcctaaat
gagaaggaatctattttctggaagcaaattatcatgaaatatttatacccactgaatgaa
gacaaaattcaccaagaaaaggttcaacatgatctcaagaatttaagaaataacgtcgtg
tttggatttttcatgacaagtgcactctggatcgcattgtcaatgcagttgcaaatactc
caggaagatcttaaagatactttattctttaaaattccacgctgggaaatttcagatgat
cttgcatttgaaccgcttggtctaatattcctggcatttttcgctacgatactgtgcgta
cagtttttgggcatgttcattcatcgatggggtacaatgctacatatgctatcaatcacg
gatatatcttgcgggaaaacgttcacggagaaagacaaagttcgggagataattatgaag
tcgatggagctacagaaattatgtaatattgaaaacgagccgactcctgactatgaagat
tcgttacctgactatgagccaacggatgacgaagaatattacgaatctcagtctgtagtg
acaagtgattcagctgatgtttctacatggtccaacaacccgccagcttatgaaaccatg
tcagcagccatgatgcatcggaatggtcggcaagatatctttaatagacgcgggaacgca
agtggggcggcgctgcgaaaagcgttcgagaagcgttttaggaatgagaaacagttacac
agaatggacgctgacgtgcccatcaatagcaggatgtatagcatgggtgaaaatgatgca
gcgtcaattgtatag
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integrated database retrieval system
