Ruditapes philippinarum (Manila clam): 132738932
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Entry
132738932 CDS
T09557
Name
(RefSeq) CXXC-type zinc finger protein 1-like
KO
K14960
COMPASS component SPP1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132738932
03036 Chromosome and associated proteins [BR:
rphi03036
]
132738932
Transcription factors [BR:
rphi03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
132738932
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
132738932
COMPASS/SET1 complex (yeast)
132738932
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
DUF2153
PHD_3
Motif
Other DBs
NCBI-GeneID:
132738932
NCBI-ProteinID:
XP_060582537
LinkDB
All DBs
Position
Unknown
AA seq
577 aa
AA seq
DB search
MTFQGSFEEFFKQQKKKQINQQFALPERKAKVDQLVKTIENTDNPDTRYCICRSTDGTRF
MIACDNCEEWYHGDCIGVTEKDAQFIKQYYCGPCRQKDPSLVTRYKHKKLKEKAEKKISL
KPEKLDRAALEYKGKLREPEIGEDKKKSSRRCGQCTACHRTEDCGRCDFCKDMKKFGGPN
RIRQKCRLRQCSNFGLGILTVKDLDDSMSSPQLKDILSSPGGVINYLKRDQEKQDKSEKK
RKKRLSGKEDTPRKKYKDKKSPTKKKQKGREHKREHHHRHYQEYEEVEEPEEEVQKQCLG
PGCVNPARFQSKYCSEECGMKLAKSRIYELLPPKIQQWQSSPCVAEEKNRRTLEKVRQEQ
MEARQKLVDLDLKHQELDALVERAKHAKCEDEKEQPSESEDETEYNLFCVTCGLEISQKT
ALKHMERCFAKFEAQTSFGSIYKTRIEGNSMFCDFYNSQSKTYCKRLKVICPEHMKEPRV
AADEVCGCPIVSDVFEEKGEICLTAKRKCNKHYGWEKCRRAQIDMERVRQWMKIDDLFEQ
ERNVRHALSNRMGVLGLMLHQTVDHNPLYPIIVPDMD
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttcaaggatcttttgaagagtttttcaagcagcagaagaaaaagcagatcaat
caacagtttgctctaccagagaggaaagctaaagttgaccaacttgttaaaacaatagag
aacacagataatcctgatactagatattgtatatgtcgatccacagatggcacacgcttt
atgatagcatgtgacaattgtgaagaatggtatcacggtgactgtataggtgtgacagag
aaagatgctcagtttatcaaacaatattactgcggtccatgtcgtcagaaggatccttct
ttggttactcgatacaaacacaagaaacttaaagaaaaggcagagaaaaagatatcactt
aaaccggagaaacttgacagggctgccctagagtataagggcaaacttcgggaaccagaa
attggagaagataagaagaagtccagtagaagatgtggacagtgcacggcgtgtcataga
acagaggactgtgggagatgtgacttttgtaaggacatgaaaaagtttggcggaccaaat
agaatccgacagaaatgcagactcagacaatgtagtaattttggtttaggtatattaaca
gtgaaagatctagatgattccatgtcatcgcctcagttgaaggatatattatctagtcct
ggtggtgtcatcaactatctgaagagagaccaagagaagcaagacaaatctgaaaagaaa
cgaaagaagagattatcaggaaaagaagatacaccgaggaagaagtataaagataagaaa
tctccaacaaagaaaaaacagaaggggagagaacataaaagagaacatcatcacaggcat
taccaggagtacgaggaagttgaggaaccagaagaggaagttcagaaacaatgtctgggt
cccggctgtgtcaacccagcaagatttcaatctaaatactgctcagaggaatgtgggatg
aaactggcaaagagccgaatatatgaactgttgccaccaaaaatccagcaatggcaaagt
agcccatgtgtggcggaggagaaaaatcgccgtacattagagaaggtccgtcaagaacag
atggaagccagacagaaacttgtagatctggatttaaaacaccaggaacttgatgcactt
gttgagagagctaaacatgccaaatgtgaagatgaaaaggaacagccttcagagtctgag
gatgagacagaatacaatttgttctgtgtaacatgtggactagaaatcagtcagaaaact
gcactgaaacatatggagagatgttttgctaagtttgaagcacagacctcatttggatcc
atttacaagactcgtatagagggcaactcaatgttttgtgatttttacaacagtcagagt
aaaacatactgtaaacgactcaaagtaatatgtcctgagcatatgaaagaacccagggta
gcagcagatgaagtttgtggatgtccaatagtatctgacgtgttcgaagagaaaggtgaa
atttgcctgactgctaaacgaaaatgcaacaaacattatggctgggaaaaatgtagaagg
gctcaaatagatatggaaagagtaagacagtggatgaaaatagatgacttattcgagcag
gagagaaatgtccgacacgcactttctaacagaatgggcgtacttggtcttatgttacat
caaacagttgatcacaatcctttataccctatcatcgtacctgatatggattga
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integrated database retrieval system
