Ruditapes philippinarum (Manila clam): 132739048
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Entry
132739048 CDS
T09557
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 44-like
KO
K11834
ubiquitin carboxyl-terminal hydrolase 44/49 [EC:
3.4.19.12
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rphi01002
]
132739048
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132739048
Enzymes [BR:
rphi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
132739048
Peptidases and inhibitors [BR:
rphi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
132739048
Ubiquitin system [BR:
rphi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
132739048
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
UPF0149
DUF3797
Motif
Other DBs
NCBI-GeneID:
132739048
NCBI-ProteinID:
XP_060582683
LinkDB
All DBs
Position
Unknown
AA seq
842 aa
AA seq
DB search
MEKCLHVSKIRPAWDHSILNPEKWLCYLCRTTESVWACLSCSNVACGRFNEKHALKHYQE
SKHPISIEVNEKYVYCYACDDYVLNDNAAGDIKLLRSALSAIATQKFTDIESRGRRLLRS
YSHSGVVHRDEADDDDKVATAEWHRRQRLLAKVFNSWRFYIQREKSRKRRSYDKQLVQLT
ASSSSTVFKRRTITPGVTGLKNLGNTCYMNSVLQVLSHIEGFRDFFLKMRYSFEASSDGS
PLVKSVVATKPAVVAPAAAKQYARQTTVECFQHLMSTDGQKQTTQKKKLKGGLNGGSTQS
TSSSVRQQLICDVESQGNQDTNVSLCGELHGLFRVLWSGKWAQVSPHAFLRAVWQAIPMF
KGYAQHDAQEFLCELLDKIQRELNSTPSQPSSQLLDDLFLGQLVSKVQCQSCKNISETFE
SYMDLSLEFPNRYQITKQNSRVAEDICHITEMLAKFTEEEHLEGNIYACEKCNKGRSKSG
TVYTEAKKQLMINELPPILRLHLKRFRWSGRIHREKISTHVATDELLDLKPFCSNQTAGQ
LQYRLFGVIIHHGRGFGSGHYTAYTWNKEAESWVNCNDSRMILSNVEDVLTAQAYILFYK
AEHPNKLEKPVSLTSECSNETVAYSLKSEDTVCYKDEEECNDIPAKSSLSLSSQMSSPVL
KLTRVNSPASFTSTSSSSSSLPKLSPASQFSSSSHEKLSLKADGTLLLSDDDDVTNLNSS
STLNDTVHVIDKEISFNFKPTDSPRVTRSSKRSLDNCDKQNTQNSKRAKKLSFETGSFYA
KSPSEMPEKKQDESKLNRRRTRSMKNENNSSLLKLEKYIGRSHAQDDNETAQHIKRRKST
FW
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggagaaatgtttgcatgtgtccaaaattcgaccagcctgggatcattctattctgaac
ccagaaaaatggctttgttacctctgccgtacaactgaaagtgtttgggcatgtttaagt
tgttcaaatgttgcatgtggcaggttcaatgagaaacatgcattgaaacactaccaggag
agtaagcatcctatcagtattgaagtgaatgaaaaatatgtctactgttatgcatgtgat
gactacgtgttaaatgacaatgcagcaggagacatcaaattactacgatcagcattaagt
gccatagcaacacagaagtttacagacattgagtccaggggcagaagattgcttaggtcc
tattctcactcaggggtcgtccacagagatgaagctgatgatgatgataaagttgctaca
gcagaatggcacagaaggcaaagattgttagctaaggtattcaacagttggagattctac
atccagcgtgagaagtcgcgaaagagaagatcatacgacaaacaacttgtacaactaacg
gcatcatcatcatctacagtattcaagagaagaaccataactcctggtgtgactgggcta
aaaaatctgggaaacacttgttacatgaactcagtcctccaagtattaagccacattgaa
ggattccgagactttttcttgaagatgcgctacagttttgaagccagctcggatggttcc
ccccttgttaagagtgtagtagcaacaaaaccagcagtagtagcaccagctgcagctaaa
caatatgcgagacagacaactgttgaatgttttcagcatttgatgtcaacagatggccaa
aagcagactacacagaagaagaaattgaagggaggtttaaatggtggttcaactcagtcc
actagttcatctgtacgtcaacaactcatctgtgatgtggaatctcagggaaatcaggat
actaatgtatcattatgtggagaacttcatggtttatttcgtgtattatggtcgggtaaa
tgggcacaggtcagtccccatgcttttttgcgggcagtatggcaggctattccaatgttt
aaaggctatgcacaacacgatgctcaggaattcttgtgtgagctgttagacaagatacaa
cgagagttaaacagcacaccaagtcagccatcatcacaacttctagatgatctcttccta
ggacaacttgttagtaaggtacagtgccagtcatgtaagaatataagtgagacgtttgaa
tcctacatggatctgtcgctagaattcccaaatagatatcagatcacaaaacagaattca
cgagttgctgaagatatttgtcatattacagaaatgttagctaagtttacagaggaggag
catcttgaaggaaacatttatgcatgtgaaaaatgcaataaaggtcgtagtaaatcgggg
acagtttatacagaggccaaaaaacaacttatgataaacgagctgccacctatactacgt
ctacatctgaaaagattcagatggtcaggtcgaatacatagagagaagataagcactcat
gtggccacagacgagcttctggacctgaaacctttctgctcaaaccagacagccggacag
ttacagtaccgtctgtttggtgtcatcatacatcatggtagaggattcggctcaggacat
tacacagcttatacctggaataaagaagcagaatcttgggtaaactgcaatgattcgaga
atgattttatcaaatgtagaggacgtactaacagcacaggcatatattctcttctacaag
gcagaacatccaaataaacttgagaaaccagtttccttaacatcagagtgcagcaatgaa
actgtagcgtacagtctgaaatctgaggacacagtctgttataaagatgaggaagagtgt
aatgatattcctgctaaatcatcattgtcgttgtcatcacaaatgtcatctcctgtgctg
aaattgactcgggtaaattcaccagcatcatttacgtcaacatcgtcctcatcatcatct
ctaccaaagttatcgccagcttctcaattttcatcatcgtctcatgaaaagctgtccttg
aaagcagacggcacattgttgctcagtgacgatgacgatgtcacaaacttaaacagttca
tcgaccttgaatgacactgtacatgtgattgataaggagatatcatttaattttaaacca
acagacagtccgagagtgacgcgcagctcaaaaaggtcccttgataattgtgataaacaa
aatacacagaactcgaaacgagcgaaaaaattgtcgtttgaaactggttcgttctatgca
aaatctcctagtgaaatgcctgaaaagaagcaagatgaatctaaattaaacaggagaaga
actcgttcaatgaaaaatgaaaataactcttcgttattgaaactagaaaagtacatcggt
cgtagtcacgcgcaagatgataacgaaacagctcagcatatcaaaaggcggaaatcaacg
ttctggtga
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integrated database retrieval system
