KEGG   Ruditapes philippinarum (Manila clam): 132739111
Entry
132739111         CDS       T09557                                 
Name
(RefSeq) uncharacterized protein LOC132739111
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
rphi  Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rphi03000]
    132739111
   04121 Ubiquitin system [BR:rphi04121]
    132739111
Transcription factors [BR:rphi03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    132739111
Ubiquitin system [BR:rphi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    132739111
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-RING_UBOX zf-CCCH zf-RING_5 zf-C3HC4_4 zf_CCCH_4 zf-C3HC4_2 zf-RING_2 zf-C3HC4_3 zf-C3HC4 zf-RING_10 Prok-RING_4 Sina_RING
Other DBs
NCBI-GeneID: 132739111
NCBI-ProteinID: XP_060582745
LinkDB
Position
Unknown
AA seq 1606 aa
MPIQAPQWTEFLSCPVCYNVFNEELYRPISLACGHTVCKTCLSKFQQRKCPFDQSLITRD
IDELPANFALLQLLSVSASPDTKLPCVPEEYKKHYEKSKKCVEDLALLLKPVSSTSTGSI
ISVSTSSSSSPGVPSCVLSRPMQRKLISLVNCQLVEEEGRARALRAARSLGERTVTELIL
QHQNPQQLSSNLWASVRGRGCQFLGPGMQEEVLKLILLALEDGSVLSRKVLVLFVVQRLE
AQYPQASKTAIGHVVQLLYRASCFMVTKRDEESSLMQLKEEFRSYEFLRREHDSQIVQIA
MEAGLRIAPDQWSSLLYGDSTHKSHMQSIIDKLQTPQTFSQSVSELLIALQRTGDPYSLS
QLRPELEFLSNIDPSPDVPCPTWDNLVGVLRAVKTVIEGLVKFLQSAGARKPDLSMPFNA
RYKTSYCRDYMEHGNCPRANSCTFAHSEEELDKYRQKSRKIPRGPGSYRDDDRSQYDSYD
YLDDKDSYGYRHDHSQSRGASYPPKPFQLSKSMTHPVSSLQRHPPPKRPQLPQGPVPNPG
APPLYKSPPTQRPPPPFVAPPLQSAVPGQTTPVQPQFEMTPPPQLATPQAVMTQQMAPPI
QETPSPQSEQFVVVGKPVCQTVDNVDMGDNMIKPPVEMVIGPGGYIQPTGNIVQSPVTPT
VNFATPTHEYISQVDPALQQQVGNSPIAVMPPNDDSAILQAGNVIPQAKNMVMPQGLPPS
MAPPQMSVQVNPQGMMQQGMSMEMQQGAMMPGGGASNMPPNMPQIGGMMYPFMPPYGPPA
GSGMMPPRFSVHPMMYGQYPYPAVHPYMAYYQQGFVSGENSQLQYDNYYTSLNPFAEPWK
PGMGPGPNHDRRAQFSVKNGAEKCSMCSEKDQEEKRKRYLCDKHKNEKDCVHNEEYNYKQ
SSTDKTNVKFPDLGKSYREDGQHNQNGYNSGSSDNKKFVSDLAKSKKCTVNESYSYENEL
SNISSSEEEVPEWSTNDDFEDEEYDESVTEAFSLKLQEEARSQSRDKQYDRKDYKEQQKE
SVKVISSSSTALSTAKTPPIPVMMEPNAKLYRQSLNNLREKRNSLIQQLQEINKEATAHE
HKLEELSESLPNLFRFDHVDFKEFDSATLKEATVYASTLKHPEPLDTGPFSLKKIAPSNG
EIFERLGAISGVPPRSVNDSIIASWTAATLKYSEYQNNTVETNQTEALASQAASSESNSK
TTYKSTANSSSNWSNVDQDFPYWKDVTQNLDSPLTTPPSTPCPASVNNSYCGLKAMSEKA
SGSYDPISHRSKNIASSHRAESVNGTYTSTYGQPDSNKTSTSSDTRYYGSRSSVQVNSSV
NAGLPINHSGGYEGSTVVSAASLPSSVRSSQMLATVSSYTVSPSQMATASYTARSQPMKY
STSYEPPAEACGPTTSYWPTTPSNQGSTMSMSSSTSYRSSSQIYGSSSAATFYTSSDMQS
QPSFSRFMNLNEEDDIPFIEGSPIISKYGPISRGIKTAQQTAIQAENAADDDATKTVPVT
AVTPLKGPPLPSAQRVPSRFTQQDDAEQKTNKKSSSPLTAYEKSYSLWTTQLNLLEQKAK
KASTEDEKLSVKLQAVQMQIALKEQELQQAQVTETAKCSEYMKNRH
NT seq 4821 nt   +upstreamnt  +downstreamnt
atgccgatacaggcaccacagtggacagagtttttatcctgtcctgtgtgctataatgtc
ttcaatgaagagctatataggccaatcagtctggcctgtggtcacactgtctgtaaaaca
tgcttgtcaaagttccagcagcggaagtgcccgtttgatcagtctctgataacacgagac
atcgacgagctccccgctaactttgcattgttacagttactcagcgtgtcagcgtcacct
gataccaaacttccatgtgtaccagaggaatacaagaaacattatgaaaagtctaagaaa
tgtgtggaggatctggctctgcttttgaaaccagtctcatccaccagtactgggtcaata
atatcagtatccacatcaagttctagtagtcccggagtaccaagctgtgtcttaagtaga
cctatgcaacgtaagctgatctcgctggttaactgtcagctagttgaagaggagggtcgt
gcacgagctctacgtgctgcaaggtcacttggtgaaaggacggtcactgaacttatattg
cagcatcaaaatcctcaacagctctcatcaaatctctgggcgtcagtacgtggtcgtggg
tgtcaatttctcgggcctgggatgcaagaggaagtgctgaagctgattctgcttgcacta
gaagatggttcggttttgtcaaggaaggtattagttctgtttgtggtacagagactggaa
gctcaatacccacaggcatctaagactgctataggtcatgtggtacagctgttatataga
gcctcctgttttatggtgaccaaaagagatgaggaatcatcattgatgcagctgaaggaa
gaatttcgttcgtacgagtttctgagacgtgagcatgattcacagattgtacagattgca
atggaagccggactgaggatcgcacctgaccagtggtcatctttattgtatggtgattcc
actcacaagtctcacatgcagtctataattgacaagcttcagacccctcagacattctca
cagagtgtgagtgaactgttgatagccttacagagaacaggggacccctatagtttatca
cagctgagaccagaattagagttcctgtctaacatagaccctagtccagatgtaccttgc
cctacctgggataacttagttggtgtgttaagggctgtcaagactgtgatcgaaggcttg
gtgaagtttctacagagtgccggtgccagaaaaccggatctatccatgccgtttaatgcc
cggtataaaaccagctattgtagagattatatggagcatggaaactgtcctagagctaac
agttgtacatttgctcattctgaagaagagttggataagtacaggcagaaaagtaggaaa
ataccacgaggtcctggtagctatagagatgatgacagatctcagtatgatagttatgac
tatttggatgataaagatagttatggttatagacacgatcattcacagtcaaggggcgcc
tcttatcctcccaaaccatttcaactctctaaatcaatgacccacccagtgtcttctctt
caaagacatccacctccaaagcgacctcaacttcctcaaggcccagttcctaatccagga
gctccgcctttatataaatcccctcccacacaaagacctccccctccatttgtagcacct
cctctacaatcagcagttcctggtcagacgactcctgtacaacctcaatttgaaatgact
ccgcctccacagttagcaacgccccaggcagtcatgacgcaacagatggctccgcctata
caagaaaccccatccccacaaagtgaacaatttgtagttgttggaaaacctgtttgtcag
actgttgataatgtagatatgggtgataatatgattaaaccacctgttgagatggtgatt
ggaccaggtggatacatccagcctacaggtaacatagtacagtcaccagtcacacccaca
gttaattttgccacacctactcatgaatatatttcacaagtagatccagcattacagcaa
caagttggaaattcccccatagctgtcatgcctccaaatgatgactcagctattcttcag
gcaggaaatgttattcctcaagcaaaaaacatggtaatgccacaaggcctgcctccttca
atggccccgcctcaaatgtcagttcaagtcaatccccagggtatgatgcagcaaggaatg
agtatggaaatgcagcaaggggcaatgatgccaggaggaggagcttccaatatgccaccc
aacatgccacagattggtggaatgatgtatccatttatgccaccttatggtcctccagct
ggttctggtatgatgccaccaagattttcagtgcacccgatgatgtacggacagtatccg
taccctgccgtacacccgtacatggcgtattaccagcaaggctttgtttctggtgagaac
tcccagttacaatatgacaactattacacgtctctcaatccatttgctgaaccatggaaa
ccaggtatgggtccggggcccaaccatgacagaagagcacagtttagtgttaaaaatgga
gcagagaaatgctctatgtgcagtgagaaagatcaggaggaaaagcgaaaacgatacctc
tgtgacaaacataaaaatgaaaaagactgtgtccataatgaagagtataactataaacaa
agcagtactgataaaacgaatgtaaaatttcctgatttgggaaaatcttatcgagaagat
gggcagcataatcaaaatggatacaatagcggaagttcagacaataaaaaatttgtgagc
gatttagcgaaatctaagaaatgtactgttaatgaaagttattcttacgaaaatgagttg
agtaatataagcagtagtgaagaagaggttccggaatggagtactaacgatgattttgag
gatgaagaatatgacgagagtgtgactgaggcgttcagcttgaagttacaagaggaagct
cggtcacaatcaagagataaacaatatgacagaaaagattacaaggaacaacaaaaggag
tcggtgaaggtgatatcatcatcatcaacagctttgagcacagcaaaaactccaccaata
cctgtgatgatggagccaaatgcaaaactttatagacaatcattgaacaatttgagagaa
aaacgcaattcattgatacaacaactacaggagatcaacaaggaggctacagcacatgaa
cacaaactagaggagctgtcggaaagcttgcctaatttattcagatttgatcatgtagac
tttaaagagtttgattctgctacccttaaagaagctacggtatatgccagtacgttaaaa
catcctgaaccactcgatactggtccctttagtttaaagaaaatagcaccatctaacggc
gagatatttgagagactaggagctatttctggagtaccccctcgatctgtcaatgacagc
attatagcctcatggacggctgctactctcaaatactcagagtatcagaacaatactgta
gaaaccaatcagacagaggctctcgcaagtcaggctgcttcatccgagtccaacagtaaa
acaacttataagagcacggccaatagttcttcaaattggagtaatgtagatcaggatttt
ccatattggaaagatgttactcaaaatttggattctcctttgacgacccctcccagcacc
ccttgtccggcctctgtcaacaactcttattgtggtttgaaggctatgtcggagaaggcc
tcgggcagttatgatcctatttctcataggtctaagaacattgccagtagtcatagggct
gaatcagtgaacggcacttatacgtcaacatacggtcagccggattcaaataagacaagc
acttcttcagatacaaggtattatggttcaaggtcgtcagtacaagttaacagctctgta
aatgcagggttgcctattaaccattctggaggttatgagggaagtactgtcgtaagtgct
gcgtcattgccatcttctgtacgaagctctcaaatgcttgcaacagtgtcgtcatataca
gttagcccgtcacaaatggccactgcttcatatacggctagaagtcagcctatgaagtat
tcaacaagttatgaaccgccagcagaagcttgtggtccaacgacaagttactggccaaca
acaccgtctaatcagggttcgaccatgagcatgtcgtcttcaacatcttaccgttcttct
tctcagatatacggttcctcttcagctgcaacattttacacatcttctgatatgcagtca
caaccttcattttcacgattcatgaatttgaatgaggaagatgatatcccatttatagaa
gggtcccccatcatatctaaatacggtcccatttcccgcggcattaaaactgcccagcag
acggcaatacaggctgagaatgctgccgatgatgatgctacgaaaactgtaccagtaaca
gcagtgacgccactaaaagggcctcctttacccagcgcccagagggtacccagtaggttc
acacagcaggatgatgctgaacaaaaaacgaacaaaaagagttcttcccccttaactgct
tacgagaagtcctactcattatggacaacacagcttaacctgttggagcagaaagcaaag
aaggcgagcacagaggatgagaaactcagcgtaaagttacaggctgtacagatgcagata
gctctgaaagaacaagagctacagcaagctcaggtaacagagactgccaagtgctcagaa
tatatgaagaaccgtcattga

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