Ruditapes philippinarum (Manila clam): 132739124
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Entry
132739124 CDS
T09557
Name
(RefSeq) DNA polymerase delta subunit 3-like isoform X1
KO
K03504
DNA polymerase delta subunit 3
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03030
DNA replication
rphi03410
Base excision repair
rphi03420
Nucleotide excision repair
rphi03430
Mismatch repair
rphi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
132739124
03410 Base excision repair
132739124
03420 Nucleotide excision repair
132739124
03430 Mismatch repair
132739124
03440 Homologous recombination
132739124
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rphi01009
]
132739124
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rphi03032
]
132739124
03400 DNA repair and recombination proteins [BR:
rphi03400
]
132739124
Protein phosphatases and associated proteins [BR:
rphi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132739124
DNA replication proteins [BR:
rphi03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
132739124
DNA repair and recombination proteins [BR:
rphi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
132739124
MMR (mismatch excision repair)
DNA polymerase delta complex
132739124
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
132739124
NCBI-ProteinID:
XP_060582761
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MTVEDLYIDNIDEFVKDENKIVTYKWLSQTLQVHCNTAKQMLYKYIDTERNTKETDSLCV
TYFVSGLTKPDDSGEQMFKCTVVPEEKLESCKSMLAILTSCHVYSVQKSKLKDSNALYMT
DYAKFKENVFDCNKYSSIHYDRATLRSEDELSLLSVNYTATEPEKKPNTASNGGTTSKPA
GKKQPQSDIASMFAKSDAGKKDSKADVKPLVKEEPKTSTKDKGGNKGGNKGGNKAGNKAG
MTAFFSKQTDKKVQEKSPEKKKSPVKTETKSKKTARQEDSDEEIVRSKRRRTQDLFDSGS
EEEMEEEPESPIPPTPPPTPAVAEPEIKAESPDIEEIQEPVSEKHSKSEESSKGAQSGKR
RVRRRKQVNKTYMDKDGFMVTEKVYEEESTDASEAEEPVPKETKKTGPTKSPPKGKKSPK
KASPGKKGQGSGKQTSLMSFFKKS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcgaagacttgtatatagacaatatagatgaatttgtgaaggatgaaaacaaa
attgtaacatataagtggctgagtcagacattgcaagttcactgtaatactgccaaacag
atgctttacaagtatatagacacagagagaaatacgaaggagacagatagcttatgtgtc
acatactttgtatctggcctgaccaaaccagatgatagtggtgaacagatgtttaagtgt
acagtagtaccagaagagaaactagagtcatgtaaatcaatgctggcaatcctcacaagc
tgccatgtttatagtgtgcagaaatcaaaattaaaggattccaatgctttatatatgaca
gactatgccaagtttaaggagaatgtatttgattgcaacaagtatagcagtatacattat
gacagagcaacattacgatctgaagatgagctaagccttctatctgttaactatacagct
acagaaccagaaaagaagcctaacactgcatcaaatggcggtacaacatcaaagccagca
ggcaagaaacagccccagtcagatattgctagtatgtttgccaagtctgatgctggaaag
aaagacagtaaagctgatgttaaaccattggtaaaagaggagccaaaaacttcaacaaag
gataaaggcggtaataaaggtggtaataaaggtggcaacaaagctggtaacaaagctggt
atgacggcattcttctccaaacaaacagacaaaaaagtacaagaaaagtcacctgagaaa
aagaaatcccctgttaaaactgaaacaaagtcaaagaaaacagctagacaagaagattcg
gatgaagagattgtgaggtcaaagagacgaaggacacaggacctgtttgacagtggcagt
gaagaagaaatggaggaggaaccagagagtccaataccacctacaccgcccccaactcca
gctgtcgctgagccagaaatcaaagctgagtctccagatattgaggaaatacaagaacct
gtgtcagaaaagcattctaaaagtgaagagtcatcaaagggagctcaatctggtaaaaga
agagtaagaagaagaaagcaagtcaataagacctacatggataaagatggatttatggtt
acagaaaaagtatacgaggaggaatctactgatgcttctgaagcagaagagcctgtacct
aaagaaacaaagaaaactggaccaactaaatcacctccaaagggtaaaaagtcaccaaag
aaagcttcaccaggaaagaaaggtcaaggaagtgggaaacaaacatctctcatgtcattt
ttcaaaaaatcttga
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