KEGG   Ruditapes philippinarum (Manila clam): 132739417
Entry
132739417         CDS       T09557                                 
Name
(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta-like isoform X1
  KO
K11583  serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    132739417
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rphi01009]
    132739417
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rphi03019]
    132739417
   03036 Chromosome and associated proteins [BR:rphi03036]
    132739417
Protein phosphatases and associated proteins [BR:rphi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     132739417
Messenger RNA biogenesis [BR:rphi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     132739417
Chromosome and associated proteins [BR:rphi03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     132739417
SSDB
Motif
Pfam: EF-hand_13 P2R3B_EF-hand EF-hand_7 EF-hand_1 EF-hand_6 EF-hand_5 zf-C2H2_7th_ZNF462
Other DBs
NCBI-GeneID: 132739417
NCBI-ProteinID: XP_060583108
LinkDB
Position
Unknown
AA seq 694 aa
MMMKEEVLFESPPVKLPVGFMKNGVKLKNNIRNNVNHNNNIVKMSEVRTSSGACIKYVHS
KVTLYYSSRIELKWRRALHHCQTCDYGDVSVNGVMSPCGAIHRGVCTPVTIEQLMSPQKM
SRPVVPHPGRHHHMKSGSSHNGLPTGKHHSTSNVPSSHSSSLYVQTISNGNVSNNKDSVL
KDLRDRDHEKENTDINIQNNSATHTLDTLSSSSRESRTKKKDNSNRQSKSVIPNANIPKF
HFPMGRPSEKDDTEEILLRVSQEFSKVEGGKISKQQMAIVTKACGLPLYWKCPLFNASGG
SKQGFITYQMFSSMWKRLNQTCHDQASLFVMLLAKPGTNYIEDDDLVPLLQDVVDTHPGL
TFLLEAPEFHSRYVNTVIARIMYCVNRSWTGKITIQELRKSNFLRILSIIEDEDDINQIT
DFFSYEHFYVIYCKFWELDKDHDLFIDKTDLARHNEHAISTRMIERIFSGAVTRGKTFEE
GKMSYPEFVWFLLSEEDKKHPTSIEYWFRCMDIDGDGLISMYEMEYFYEEQMQKMEALGI
ERLPFEDCLCQMLDLVQPESRLQVTLKDLKRCKMTNIFFDTFMNLDKFLEHEQRDPFANL
RDLESDIPEPTDWEKYAAEEYEILVAEEGANEQEEIHYEDDFEPDDDEAIPDGLTLNSGD
KRSNEPIQGRGLGAGQSVHTIEDDIYDFSNSSTY
NT seq 2085 nt   +upstreamnt  +downstreamnt
atgatgatgaaggaggaagtgcttttcgagtcgccgccggtgaaattaccggtcggtttt
atgaaaaatggagtaaagctgaaaaataatatccggaataatgtgaaccataacaataat
atcgtgaaaatgagcgaagtcagaactagtagtggtgcttgtattaagtacgttcactca
aaggtaaccctctactatagtagcaggatcgagctcaaatggcgtagagccttacatcat
tgtcagacatgcgactacggagatgtgtctgtgaatggggttatgtccccttgtggtgct
attcatcgcggagtgtgtactccagtgacaatagaacagttaatgtcaccgcagaaaatg
agccggcctgttgtacctcatccaggtcggcaccatcatatgaaatctggatctagtcat
aatggattgcccaccggcaaacaccattctacctcaaatgtaccttctagtcattcttca
agcctctatgttcagacaatctcaaatggaaatgtttcaaataataaagacagtgtactg
aaagatttacgtgatcgtgatcatgagaaggagaacacggacattaacattcaaaataac
agtgctacacacactttagatactctttcctcctcctcaagggagagtcggactaaaaag
aaagataactctaatagacaaagtaaatctgtgatacctaatgcaaatataccaaaattt
cattttccgatgggtcgtccgagtgagaaggacgatacggaggaaatattactacgggtt
tctcaagaattctcgaaagtggaaggcgggaaaatatcaaagcagcaaatggccatcgtt
accaaggcatgtggtctacctctctactggaaatgtccattgtttaatgccagtggaggg
agcaaacaagggtttattacatatcaaatgttttcctcaatgtggaaaaggttgaatcag
acatgccatgatcaagcctcactatttgtcatgcttcttgcaaagccagggaccaactac
atagaagatgatgatttggttcccctcttgcaagatgttgtggacactcatccgggtctc
acgtttttactggaagctccagagttccactctagatatgttaacactgtaatagctagg
ataatgtattgtgtaaataggtcatggacagggaagataactatacaagaacttaggaaa
tccaactttttacgaattttgagtatcatcgaggatgaagatgacattaaccagataaca
gactttttctcttacgaacatttctatgtgatatattgtaaattctgggagctcgataag
gaccatgatctatttatagacaaaaccgatctcgctagacataacgaacatgctatttct
acacgaatgatagaaaggatattctctggtgctgtaactaggggtaaaactttcgaggag
ggaaaaatgagctatccagaatttgtgtggtttttactgtctgaagaagataaaaaacat
ccaactagtatagaatattggtttagatgtatggacattgatggagatgggcttatatca
atgtacgagatggaatatttctatgaggaacaaatgcagaaaatggaagccctgggtata
gaaaggttgccatttgaagattgtctatgtcaaatgttagaccttgtacagccggagtca
agactacaagttacgttaaaagatctgaaacgttgtaagatgacaaatattttcttcgat
actttcatgaatctcgacaagttcctcgaacacgaacagagagatccgtttgccaatctc
agggacttggagagtgatatccctgaacctacagactgggagaaatacgcagccgaggaa
tacgagatattagttgccgaggaaggagccaatgaacaagaagaaatacactatgaggat
gatttcgaacccgatgatgacgaagccattccggacggtctgaccttgaactctggtgat
aagagatctaacgagcccattcagggacgtgggttaggtgctggccagtcggtacacact
atagaggatgacatttacgattttagtaattcttcaacgtactga

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