Ruditapes philippinarum (Manila clam): 132739421
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Entry
132739421 CDS
T09557
Name
(RefSeq) uncharacterized protein LOC132739421
KO
K03257
translation initiation factor 4A
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132739421
03012 Translation factors [BR:
rphi03012
]
132739421
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rphi04147
]
132739421
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
132739421
mRNA cycle factors
Stress granule specific factors
132739421
Translation factors [BR:
rphi03012
]
Eukaryotic type
Initiation factors
eIF-4
132739421
Exosome [BR:
rphi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132739421
Exosomal proteins of bladder cancer cells
132739421
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
ResIII
Helicase_RecD
DASH_Ask1
AAA_22
Motif
Other DBs
NCBI-GeneID:
132739421
NCBI-ProteinID:
XP_060583118
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MTSVQQSTERSVEFTTARAHEEEKYDPRVSARGRDDERPSKERNTPCQTTDPFENPDSVG
SNWGDDDDQGTKYTEVERGDQGGEDAVPELCDNFDDMNLKDDLLRGLYGYGFEKPSTIQQ
KAILPCIRGYDVIAQAQSGTGKTATFSTAVLQRIDTDMSECQALILSPTRELAQQSYRHL
IALGDYMDVEVVAFVGGRRVSDDVRRLRSGKVHVVVGTPGRIMHLIKERALEMRCLKMFV
LDEADEMLSRGFKDQIYDVFRHTPEDVQVILVSATMPTEVLDVTSRFMRNPVRILVNKEE
LTLDGIRQFYVNVEREEWKFETLCDLYNSVCVNQAVIFCNSRRKVETLTRQMNDRDFTVS
AIHGDIDQDERETIMREFRTGSSRVLITTDLLARGIDVQQVSLVINYDLPFVRENYIHRI
GRSGRFGRKGVAINFITFNDERVLKDIEQFYNTEVQEMPRNIADYM
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtgtacaacaatcaactgaaagaagcgtagaattcacgactgcacgtgcgcac
gaggaggagaagtacgacccgagggttagcgcccgagggagggacgacgagagaccttca
aaagaaaggaacactccgtgtcaaactacagacccgtttgaaaatccggatagtgtcgga
tctaactggggcgacgatgacgaccaagggacaaagtacactgaggtggagagaggtgac
cagggaggggaggatgctgtaccagagttatgtgacaactttgacgacatgaatttgaag
gatgatctactcagagggctttacggctatggttttgaaaaaccttcaacaatccagcag
aaggcaattttaccatgcattagaggatatgacgtcattgcccaggctcagtcaggtaca
ggaaagactgcaacgttttcaacggcggtgttgcagaggatcgatacagacatgtcggaa
tgccaggcactaattctctcaccaactagagagctagcccaacagtcgtatcggcatctc
attgccctgggagattacatggacgtcgaggtggtggcatttgttggtgggcggcgtgtc
agtgatgacgtcagacgcttaagaagcggcaaggtgcacgtagttgtcgggactcctggt
cgcattatgcaccttatcaaggagcgagcacttgaaatgcgctgtctgaagatgttcgtt
cttgatgaagcagacgagatgttgtcacgtggtttcaaagaccagatttatgatgttttc
aggcacaccccagaagacgtccaggtgattctagtatcagccaccatgccgacggaagtt
ctggatgtaacttcgaggtttatgaggaatcctgtccgaatcttggtcaataaagaggaa
ttaacattagacggcatacgccagttttacgttaacgtcgaacgtgaggaatggaagttc
gagaccttatgtgatctttacaacagtgtgtgtgtgaaccaggctgtgattttctgtaac
agtcgtaggaaggttgaaacattaacccgacagatgaacgaccgagatttcaccgtatct
gccatacatggggatattgaccaagacgaacgtgaaactatcatgcgagagttccgcacg
ggttccagtcgcgtgcttataacaactgacctacttgcacgaggaattgacgtccaacaa
gtatctcttgttattaattatgatctaccattcgtaagagaaaactacattcacaggatc
ggacggagtgggagattcggcagaaagggcgtagccatcaattttatcacgttcaatgac
gaaagggtcttgaaagacattgaacagttctacaacacggaagttcaggagatgccaaga
aatattgcagattatatgtaa
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