KEGG   Ruditapes philippinarum (Manila clam): 132739504
Entry
132739504         CDS       T09557                                 
Name
(RefSeq) WD repeat-containing protein 48-like
  KO
K15361  WD repeat-containing protein 48
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    132739504
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rphi03400]
    132739504
DNA repair and recombination proteins [BR:rphi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     132739504
SSDB
Motif
Pfam: DUF3337 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML_2 Beta-prop_EML EIF3I Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_EIPR1 NBCH_WD40 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_DCAF12 WD_LRWD1 Beta-prop_DCAF4 WDR54 PEP5_VPS11_N RAWUL Beta-prop_VPS8 Beta-prop_Vps41 WD40_like
Other DBs
NCBI-GeneID: 132739504
NCBI-ProteinID: XP_060583205
LinkDB
Position
Unknown
AA seq 658 aa
MAKKKVQVSFVIRDEIERHHRSGVNALQYDPMLNRLYSAGRDSIIRIWNTKATSKDPYVL
SMEHHTDWVNDIVLCCGGRTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDK
EQVASAGLDRSIFLWDVNTLTALTASNNTVTTSSLNGNKDSIYSLAMNPAGTVIVSGSTE
KVLRVWDPRTCLKLMKLKGHTDNVKALVLNRDGTQCLSGSSDGMIRLWSLGQQRCVATFR
VHDEGVWALQANDSFSMVYSAGRDKRVWATDVRNNDYRCLVCEEKEPVLKLELTNNEPQS
LWVSTTSSSIKNYTLKNVNKQLMSTLENVSLPPVCSQPEFTIKGGSSIRQYYVLNDKRHI
LTKDTEENVALWDVLSARKVEDLGKVDLEEEIKNRFKMVYVPNWFSVDLKTGMLTIHLDE
TDCFSAWISAKELGVNLPSDVPDTKLNIGQQLLQALLDNWPKTHIFENQENINGNENEVQ
SPLGNYFRVPGHTPVIFSEVGRGKTLFRLLCRDAGGETEQMLLNETVPQWVVDVLVHGNS
PKSNKIPFFLQPHQSMGQKIVMKKDRLSASDMIQVRKVIEHVYEKVLGQGSDAGSQAANG
GNQEKSEELEDSSAVAEEKVELLCNEQVLNPNMDLRTVKHFIWKQGGDLTLHYRPLKT
NT seq 1977 nt   +upstreamnt  +downstreamnt
atggcaaaaaagaaagttcaggtgtcatttgtgatccgtgatgagatagagcggcatcac
aggtcaggtgttaatgcactccagtatgaccctatgcttaacagactttattcagccggc
agggattctattattaggatatggaatacaaaagcaacaagcaaggatccgtatgtttta
tcaatggagcatcatacagactgggtgaatgacattgtattatgctgtgggggaagaaca
ttgatatcagcatcatctgacacaactgtcaaagtttggaatgcccacaaaggattctgt
atgtcaacacttagaactcataaggattatgttaaagctctggcatatgctaaagataaa
gaacaggttgcctcggcagggctggacagatctatatttttatgggatgttaacacatta
actgccctaacagcctccaataacacagtaacaacatcaagtttaaatgggaacaaagat
tcaatatacagcctggcaatgaacccagctggtactgtgatagtttccggctcaacagag
aaagttttacgtgtctgggaccctcggacatgtttaaagcttatgaaacttaaaggtcac
actgacaacgtcaaagctcttgttcttaatagagatggaacacagtgtttatcaggaagt
tctgatggtatgataagattatggtcactaggacaacagagatgtgttgccacattccgt
gttcatgatgagggtgtatgggcgttacaggcaaacgatagtttttcaatggtttattct
gcgggtagagacaaaagggtctgggcaactgatgttagaaataacgattacagatgttta
gtttgtgaagaaaaagaaccagttttaaagttggagttaaccaataatgaaccacagtcc
ctatgggtttctaccacaagttccagtatcaaaaattatactttaaagaatgtaaataaa
cagttgatgtctacgttagaaaatgtctcactaccaccagtctgttcacaaccagaattt
acaataaaaggtggttcaagtatacgacagtattacgttttgaatgacaagcgacatatt
ttaaccaaagatacagaagaaaatgtagcgctatgggatgttttaagtgcccgaaaagtt
gaagatcttggaaaagttgatttagaagaagaaattaaaaaccgatttaaaatggtgtat
gtacctaattggttttcagtggatcttaaaactgggatgttgactatacatttagacgag
acagattgtttctcagcttggatttcagcaaaggaattgggagttaatttaccgtctgat
gttcctgatactaaattaaatattggacagcagctgttacaagccttgttagataattgg
ccaaagacacacatatttgaaaatcaagaaaatattaatggaaatgagaacgaagtgcaa
tcaccgttaggaaattatttccgggttcctggtcacacacctgttatatttagtgaggtc
gggcgtggcaaaactttattcagattactgtgtcgtgatgcaggtggggagacagaacaa
atgttattaaatgaaacagttcctcaatgggtggtagatgttcttgtacatggtaactca
ccaaaatcaaacaagattccgttctttctacaacctcatcagagtatgggacagaaaatc
gtcatgaagaaggaccgattatcagctagtgatatgatccaagtccggaaggtaatagaa
catgtgtacgaaaaggttttaggtcaaggatctgatgcagggtcccaggcagctaatggt
gggaaccaggagaaaagcgaggaattagaggacagctcagccgttgctgaggaaaaggta
gaactactgtgcaatgaacaggttttgaaccccaatatggatctgagaactgtgaaacat
tttatctggaaacaaggtggtgatttaacattacattacagaccacttaaaacttga

DBGET integrated database retrieval system