Ruditapes philippinarum (Manila clam): 132739534
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Entry
132739534 CDS
T09557
Name
(RefSeq) LOW QUALITY PROTEIN: chitin synthase chs-2-like
KO
K00698
chitin synthase [EC:
2.4.1.16
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00520
Amino sugar and nucleotide sugar metabolism
rphi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
132739534
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rphi01003
]
132739534
Enzymes [BR:
rphi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.16 chitin synthase
132739534
Glycosyltransferases [BR:
rphi01003
]
Polysaccharide
Structural polysaccharide
132739534
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Chitin_synth_2
Myosin_head
Glyco_trans_2_3
ChitinSynthase_IV_N
Glyco_tranf_2_3
Glycos_transf_2
Glyco_transf_21
HEPN_RiboL-PSP
MSP1a
Motif
Other DBs
NCBI-GeneID:
132739534
NCBI-ProteinID:
XP_060583230
LinkDB
All DBs
Position
Unknown
AA seq
1733 aa
AA seq
DB search
MQLLEKLGDGDPFFVRCIKANSNLAANNFDQNVVADQLRYNGIAEIAKIRKMGFAVRKYY
TDFISRYRCLFPSPPLERQADVAQSVLRLVPSSFHRDFRCGTSRIFMTIELNDWFERILR
CRQRRAAATVTRCMRKVAEIKKEQKRIEAQRKRREELERMRQEEEERRKEKNEKDNVKTE
DKPNGLGISTGGLSASRGGFGASRGGLGASRGGLGASRGGKGSRQGLSTSVTGNDSDPPS
YSSEDDSSLTSSPFDSGGQFAGLGDTLPHDGRFRTSIESTRSPSPVVHIDDEHTERKEVD
KHYEKEKKKTEFWDVCQIIARERKIRDVDEDRGLQVIKVVTYILLFCILLWCAVAQKLSL
VVLVSPVIDRTKDNSVSEVKKFSKEAAAKHILLTIAILIPYCLTFLSSAFKWMFDNLPFP
SLSTIVLCLLVEIMHSIGLCSLAFIILPELDMVRGILLLGGVAVVPSILFPVCASDVKSS
GKNAKDDKQDQEALKNKKDDKRDQAANQSTIFRLAVFALNIITLIVQFAYISAVLVLDHF
VDDSRIDNETNTIVFFILSMLFVSCAYWENFVDDRFCWTENSKGRCKQSILKAKFELQEA
RPIISTCTSFIKIGTTLLLSWIIKAYYEENIDDDDNHKRIEKVTFSEAFGELSENDLKRS
GAIITLILSAFVGHYVGYTACKLKLQRFSFCIPLILSTPLAVAIAAVECSRGGVLSPFTS
EKGQCREDIETLNVVLHYICGTVVWISLYWLCRHIFYPEIERLAKTERLFMNPFYCGILF
EQHLLLNRRRHTRIVSMNIKDKKVPYSLSKFNSKVNIEGDVEDDVASQAENKEKNEDIHA
SNYKNPKFRDTPMIYACATMWHETKYEMLQLMKSIFRMDRDQFVRRHAEQVFNKEDEDFY
DFEAHILFDDAMAIDDNNEFVPNEYVKLLATIMEEAASCVHEQSMKIKAPYKVPTPYGGQ
VIYIMPGGNFLFIHLKDKHKIRHKKRWSQVMYMYYLLGFRIVRMCDETVTAALNAGKISD
LIQWEPGSAPGPSIGRSHIFQAFDDQVLKKAQNTFLLALDGDVDFSPGAVRLLLDRMRKS
DKVGAACGRIHPIGKGPVVWFQKFEYAIAHWLQKATEHVLGCVLCSPGCFSMFRGSALMD
DNVMKKYTILPTEAAHHLMYDQGEDRWLCTLLLQQGYRVDYAAGSDAFTYAPEGFDEFFK
QRRRWMPSTVFNIIDLLADYKNTVYVNSNISMLYILYQGALLLSTIVGPATVLMMIAGAN
MVVFKVTVIWGYVIALAPAIFYFILCFYVKEKTQLRVAEILTALYAFVMMIVLVGTIVTA
AQESPFHPSVIFLGFLVIAFTFSALLHPKEWSCIVFGALYFLLIPTGFLLLNIYSLTNLN
NVSWGTREVPKKKTQAEIEEEKRQTEEKEKKKKERGFFGRLFPTFSTKEFKDILSKFTES
QNAKKEDVSFHETNKLLKELNEHLKEIVNQNNKPKPAPTETVFLDDDTTDHDEPGKTERQ
ELAQVKLKGILKQPHHSQHAKKHEHISDSKRNIDDDSEETIYDRVRKTRNELVNPAWAEC
KELGNGKVMILASEELNFWESFITKYLKPLKPKKEEIENTAKSLIDLRNNIALGMAMINL
LWIAVNFMFQFERPTTISLKISGSSDNPDSPDYLEENQENTDGSASTNNAIEVDLLGLLF
IIFYLAILLLQFIGMIIHRWGTFQHLVSVTKLKNPLSQVILLISILYLNHTLH
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atgcagttattagagaaattgggtgacggagacccattttttgtcaggtgcattaaagcc
aattcaaatctagcagcaaacaactttgaccagaatgttgtcgcagatcaattacgatac
aatggaatagcagaaattgcaaagataagaaaaatgggttttgcagttcgcaaatactat
acggactttatctcaagataccgttgtttatttccgtctccacctttggaaagacaggcg
gacgtggctcaaagtgttcttcgtttagtcccatctagtttccatagagatttcagatgt
ggtacatcaaggatattcatgacgatcgagctaaatgattggtttgagcgaattttgcgt
tgtcgtcaaagaagagctgctgctacagttactagatgtatgaggaaggtagcagaaata
aaaaaggaacagaaacgcattgaagctcagagaaagagacgggaagaattggaacgaatg
aggcaagaggaagaagagcggcgcaaagagaagaatgaaaaggataatgtcaaaacagaa
gataaaccaaatggtttaggtatatcaactggaggtttgagtgcatccagaggaggtttt
ggtgcttccagaggaggtttaggtgcttcaaggggaggtttaggtgcttccagaggaggt
aaaggttcaaggcaaggtttaagtacatcagtgactggaaatgatagtgaccccccttct
tattcatcggaggatgactcatcattaacatcgtccccttttgactctggaggacaattt
gcaggactaggagacacattaccacatgatggaagatttagaacatcaattgaatcgact
cgatcaccttctcctgttgtccatatcgatgacgaacacacggagaggaaagaagtggac
aaacattatgaaaaggaaaaaaagaagaccgagttctgggacgtctgtcagataattgcg
cgggaaagaaaaattcgtgacgtcgatgaggacaggggacttcaagtgatcaaagttgtc
acttacatactcttattctgtattctcctttggtgtgcagttgctcaaaaactcagcttg
gttgtccttgtgtcaccagtgattgatcgcacaaaagataattctgtgtcagaggtaaag
aaatttagtaaagaagctgcagcaaaacatattttgttgaccatcgccatcctgattcct
tactgcctgacgtttctaagcagtgcctttaaatggatgtttgacaacttaccatttcct
agcctatcaacgattgtactgtgcttgcttgtagaaataatgcattccatcggactttgt
agtctggcgttcatcattcttccagaattggacatggtccgtggaattcttttattgggt
ggcgtagctgtagtgccatcaattctatttcctgtctgtgcttcagacgtaaaaagcagt
gggaagaatgcaaaagatgataaacaagatcaggaggcgttgaagaataaaaaagatgac
aagcgagatcaggcggcaaaccaatcaaccatattcagactagctgtttttgctctaaac
ataataacattaatagtgcaatttgcatatatttccgctgttttagtgttagatcatttt
gtcgacgacagtagaatagacaatgaaactaacactattgtctttttcatattaagtatg
ctttttgtttcttgtgcatattgggaaaatttcgtagatgacagattttgctggacagaa
aattcaaaaggtcgttgtaaacagtctatattgaaggcaaaatttgaactccaagaagca
agaccaataatttcaacatgtacaagtttcattaagatcggtacaacccttcttctttca
tggattattaaggcgtattatgaagaaaacattgacgatgacgataatcataagcgtatt
gagaaagtaacattttcggaagcgtttggtgagcttagcgaaaatgatttaaagcgtagc
ggagcaataataacgctgatattgtctgcctttgtcggacattatgttggatacacagca
tgcaaattaaagctacaacgattttcgttttgtattcctctcatactatctacaccattg
gcagtagctatagcagcagttgaatgttcaaggggaggtgtgctgagcccatttacatcg
gaaaaaggacaatgccgagaagatattgaaactttgaatgtggttttacactatatttgt
ggcactgttgtgtggatatcattgtactggctatgtagacatatattttacccggaaata
gaaagacttgccaagaccgaaagattgtttatgaacccattctattgcggaattcttttt
gagcagcatctacttttaaacagacgtcgacacacaaggatagtttccatgaatataaaa
gataaaaaggttccttacagtttgtccaaatttaactcgaaagttaatatcgagggtgac
gtagaagatgacgttgcaagccaggctgaaaataaagagaaaaatgaggacattcatgca
agtaattacaaaaacccaaagttcagagacactcctatgatatacgcatgcgcaacaatg
tggcatgagactaaatatgagatgttgcagcttatgaaatctatattcagaatggataga
gatcagtttgtcagacggcatgctgaacaagtattcaataaggaagatgaagatttttat
gacttcgaagcacacattctgtttgatgatgcaatggctatagatgataataacgaattt
gttccaaatgaatatgtaaagttattggcaaccattatggaggaagctgccagctgtgta
catgaacaatctatgaaaataaaggcaccttacaaagttcctaccccatacggcggacaa
gtcatatatataatgccaggaggaaatttccttttcattcatctgaaagacaaacataaa
ataaggcataagaagcgttggtcccaggtcatgtacatgtactatttgttgggttttcgg
atcgtaagaatgtgtgacgaaacggttacagcagcactgaacgcagggaaaataagtgat
ttaattcaatgggaacctggaagtgcacctggcccatcaattggcagaagtcatatattc
caggcgttcgatgaccaagttcttaaaaaggcacaaaacacgtttctgttggcactagat
ggtgacgtagacttctcacctggtgctgtccgcctgcttcttgacaggatgagaaaaagt
gacaaggttggtgctgcttgtggtagaatacatcccattggaaaagggcctgtagtttgg
tttcaaaagttcgagtacgctatcgctcactggctacaaaaagcgacggagcatgttctt
gggtgtgtactttgcagtcccggatgtttctctatgtttagagggtcagcacttatggat
gataatgttatgaagaagtataccattctgccaacagaggctgcacatcaccttatgtat
gatcaaggcgaggatcgatggttatgtactcttcttctacagcaggggtatcgagttgac
tatgcagctggttctgatgctttcacatacgcacctgaaggttttgatgagttttttaag
caacgtcgaagatggatgccatctaccgttttcaacatcatcgacctacttgctgactat
aaaaatacagtttatgtgaattcaaatatcagcatgctgtatatcctgtatcagggtgca
ttattgttgtctacaattgttggtcctgcaactgttttaatgatgattgccggcgctaac
atggttgtcttcaaagtcactgtcatatggggatatgtaattgctcttgcccctgcgata
ttctattttatcttgtgtttttatgtgaaggaaaaaacacaactccgagtagcagagata
ctcacagcactatacgcatttgtaatgatgattgtattagttggaacaatagttactgct
gcccaagagagtccatttcatccaagtgtcatatttttaggctttctggttatagccttc
accttttcagcgctgttgcacccaaaggaatggtcatgcatcgtttttggtgctctttat
tttcttctgataccaacaggcttcttacttctcaatatatattcattgaccaacttgaat
aatgtctcatggggtactcgagaagtaccgaagaaaaaaactcaagctgaaatagaagaa
gaaaaaaggcaaactgaggaaaaagaaaagaaaaagaaagaaagaggattttttggtaga
ctctttcctacattttctacaaaagaatttaaagatattctgagcaaatttacagagagc
caaaatgcaaagaaagaggatgtaagtttccatgagacaaacaaattgcttaaagaattg
aatgagcatttaaaggaaattgttaaccaaaataataagccaaaacctgcaccgacagaa
acggtttttcttgatgacgatacaactgatcatgacgaacctggaaaaactgagagacaa
gaacttgcacaggtcaaacttaagggtatattaaaacaaccacatcactcacagcatgcc
aaaaaacatgaacacatatctgatagcaaaaggaatattgacgatgactctgaagaaaca
atatacgatagggttagaaagacgcgtaatgaactggttaatcctgcttgggcagagtgc
aaggaacttggaaacggaaaagtcatgatacttgcctcagaggaattgaatttctgggaa
agttttataaccaaatatctcaaacctcttaaacctaagaaagaagagatagagaacact
gcaaagagtttgatagacttacggaacaatattgcacttggtatggcgatgataaattta
ctatggattgccgtcaacttcatgtttcagtttgaaaggccgacgaccatatcgttgaag
atttctggatcgtctgacaatcctgatagtcctgactacctggaggaaaaccaagaaaat
accgatgggagtgcatcaactaacaatgccattgaagttgatttattgggactactcttt
attattttttacttagcaatcttgttgcttcaatttatcggaatgataatacatagatgg
ggaacgttccagcatctagtatccgtaacaaaactgaaaaaccctctttcccaggtgatt
cttttaatatccattttgtatttaaatcatacactccattga
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integrated database retrieval system
