Ruditapes philippinarum (Manila clam): 132739596
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Entry
132739596 CDS
T09557
Name
(RefSeq) probable beta-tubulin polyglutamylase isoform X1
KO
K16582
tubulin polyglutamylase TTLL6/13 [EC:
6.3.2.61
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rphi03037
]
132739596
04812 Cytoskeleton proteins [BR:
rphi04812
]
132739596
Enzymes [BR:
rphi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.61 tubulin-glutamate ligase
132739596
Cilium and associated proteins [BR:
rphi03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
132739596
Cytoskeleton proteins [BR:
rphi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylases
132739596
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TTL
ATPgrasp_YheCD
ATPgrasp_ST
ATP-grasp_3
Motif
Other DBs
NCBI-GeneID:
132739596
NCBI-ProteinID:
XP_060583314
LinkDB
All DBs
Position
Unknown
AA seq
1260 aa
AA seq
DB search
MDSDGIYEETYEDEYADDEMPDDNEDAVVLSDSSDSEESEPEDSGFSNNENGGSQELTLL
DEGPSVLIQPSILDDEDEGEDDEGTSLSMPQSIHLPPLDLLADVTAEARLMMSSKDTGIS
TQAEEEGEGEWDDDAVTTESSKDLIIEQEDKKEIEKKIPKKKKKKKKWFYICLSNCKYDV
VRKVSRKFGFKEVSDDDDWTLYWTDYSVALERVMDMKKYQKINHFPGMSEICRKDLLARN
MNRMLKMFPKEYNVFPKTWCLPADYGDFQAYCRQKKNKTYILKPESGCQGRGIWVTKNPK
DVKPHEHMICQHYMSRPLLIDGFKFDLRIYTLVTSCDPLRIFVFKDGLARFATNKYTEPT
HSNVDNVYMHLTNYAINKHSEDFIRDDEAGSKRRISTTNRYMAKKGYDVDKMWADIDDVI
IKTLISAHSVLKHNYRTCFPNHVKGSACFEILGFDVILDRKLRPYVIEVNHSPSFGTDSE
LDREIKGALVYDTLQLVNFGACDRRKCIEEERRRIKDRLLGKSNRKESREELDLAQQQYI
ESLDKYESNHLGNFRRIYPNPGSEKYEKFFHSSGTLFQETAAFKARSELARQQREEISRK
KEKLEAMLKGKKSTTGVARPESPGSRRRRSLRRTTMPARRIQSSSRTSLDMLSNESSQLQ
INIDEPVDTKKPMDILEEEELERISGLLQRDNLVRGLGIVEHVYRLLHCTPGTMGVLKSE
PRPLPPPLVVIRQYSSLKIQELPPLLTDFNYGYIYNFPNVKHNIRRLALRNLGSPQENQR
WLYTNRQMDSCLSGRQAPIRIKDKQYYKKLLDRYFGHNHALANENNSRLDKTIYRSNRNF
AGRGINNKEDLNRQFPHVRLSYSSSDRKVLLTHEPYILEGSDTEEVFELETEQDCSGQRV
DSQISVGAGSYTLQPDRSVTSVMSGLSNGSGQTGTYGLINDLGGLSQPNQIGSNSSTSSL
SMTSQASLHTHSNTHTTTNICLYPPPNPLAKPILPATTGLSKIVQISNNTVSTSQPGHGG
RSWTHKSSTAGNLGSVNERTVPSYQRNKFIRKPLGSTGRVGGPSTVIPDSEYRNLSSLLE
TEAERNRILARNGFTSNSSTDNRPDSITPNSNQKRVLSASGQRKDNDGITTQPQIKTKYV
SEATGYRTAHQSNPLWQYHLIGGQDLQRYPSQHGPGLSVVSGPAPVIQRPDLCHPSTNNP
PSSNSSISRVSSHHSSSNLSEAASNVSGLRSTRSQRIRGASNNIRLRQMEMRENHAVVFS
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atggattccgatggaatttacgaggaaacatacgaagatgaatacgctgatgatgagatg
ccggatgataatgaagatgccgtcgtgttaagcgatagttcagactcggaggaaagcgaa
ccagaagactcgggatttagtaacaatgaaaatggtggttcacaagagttgacgttacta
gacgaggggccatcagtgttgatacagccatcaatacttgatgacgaggatgaaggggaa
gacgatgaaggaacttctttaagtatgccacaatccatacatttgcctccccttgatttg
ctggcagacgtcactgcagaagctcgtttgatgatgtcatccaaagatactggtatcagt
acacaagccgaggaagaaggcgagggtgaatgggacgatgatgctgtcacaactgagtca
tctaaagatctcataatagaacaagaagataaaaaggaaatagaaaagaaaataccaaag
aaaaagaagaaaaagaaaaaatggttctacatatgtctttcaaactgtaaatatgatgtt
gttcgtaaagtgtcacgcaagtttggttttaaagaagtctcagatgatgacgactggaca
ctttactggacagattattctgtggccctggaacgggtcatggatatgaaaaaataccag
aaaatcaatcattttcctggaatgagtgaaatttgtaggaaggacttattagctaggaat
atgaaccgaatgttaaagatgtttccaaaagaatacaatgtcttccctaaaacatggtgc
cttcctgcagattatggagatttccaagcatactgtcgacagaagaaaaacaaaacatat
atattaaagccagagtccggttgccaaggtcgtggtatctgggtcacgaaaaatccaaaa
gatgttaaaccacatgaacatatgatctgtcaacattacatgtctaggcctttactaatt
gatggtttcaaatttgacttgaggatctacaccctggtgacttcttgtgacccacttaga
atatttgtgttcaaagatggtctagctagatttgctaccaacaaatacacagaacctact
catagcaatgtagacaatgtttacatgcatctcacaaactatgctataaataaacatagt
gaggattttattcgtgatgatgaagccggcagtaagcgtaggattagtacaactaataga
tacatggcaaagaaagggtacgatgtagataaaatgtgggctgatatagacgatgtgata
ataaaaacacttatctcggctcattctgtgttaaaacataactaccgcacatgttttcct
aatcatgttaaaggaagtgcttgttttgaaattcttggatttgatgtgattctagatcgg
aaactacggccatacgtaattgaggtcaatcactcaccaagttttggcacagactcggaa
ctggatcgggaaatcaagggtgctctagtttatgacacattacagctagttaattttggt
gcttgtgatagacggaaatgtatagaggaagaaagacgtaggatcaaagataggctactt
ggcaagtcaaataggaaagaatctagggaagaattagatcttgctcaacaacaatatata
gaatctcttgataaatatgagagtaatcacttaggtaactttcgtcgtatttatcctaat
cctggctcggagaagtatgagaaattcttccacagtagcggaactttattccaggagaca
gcagctttcaaagccaggagtgaacttgccagacaacaaagagaagaaatctctcgtaaa
aaggagaaattggaggcgatgttgaaagggaagaagagcacaactggtgtagctaggcca
gagagtccaggaagtagaagaaggaggtcattacgcagaacaacaatgccagcaagaaga
atacagtcaagttctagaacaagcttagatatgttgagtaatgaatcgtcacagttacaa
atcaatatagatgaaccagtagacacgaaaaaaccaatggatattttagaggaagaggaa
ctggagcgtataagtggtcttctacaaagagataaccttgtaagggggttgggcattgtg
gaacatgtgtaccgcctacttcattgtacaccaggtacaatgggtgtgttaaagtcagag
ccacgcccacttcctccaccactggtcgttatcaggcaatatagcagtttaaaaattcaa
gagttgcctcccttactgactgattttaactatgggtatatttacaactttccgaacgta
aaacacaatattcggaggctagccttgagaaatcttggcagtcctcaggaaaatcaaaga
tggctgtacacaaatcggcagatggactcgtgcctttctggacgacaagctcctattcgt
ataaaggacaaacagtactataaaaagcttcttgatcgatatttcggtcacaatcatgca
ttagcaaatgagaacaattctcgtttagacaaaaccatatataggtcaaatcgtaacttt
gccggtcgtggtattaataataaggaagatctaaaccgtcagtttccgcatgtgagactg
tcatacagcagtagtgatagaaaagtgttgctcactcatgagccctatatactggaaggc
tctgataccgaggaagtttttgaactggagacagaacaggattgttccggtcagcgtgta
gatagccagattagtgtaggtgccggtagttacacgttgcaaccggatcgcagtgtaaca
tctgttatgtccggcctttcaaatggcagtggtcagaccggcacctatggtttgatcaac
gatcttggcggtctatcgcagccgaatcaaatcggctccaatagctctacaagttctctt
tcaatgacctcacaagcttcgttgcacacgcactcaaacactcacaccacaactaacatc
tgtctgtacccacccccaaacccactagctaagcccattttaccggctacgaccggtttg
tcaaaaattgtacaaatttcaaacaatactgtctccacatctcagcctgggcatggtggt
cgcagttggacgcacaagtcaagtaccgctgggaaccttggtagtgtcaatgaaagaacg
gttccttcttaccagagaaacaagtttattcgtaagccccttggtagcaccggaagggta
ggtggtccaagtacggtgatacccgattctgaatataggaatttgtcatcattacttgaa
actgaggctgaacgaaaccggattcttgcaagaaatggttttacaagtaacagttcaacg
gataatcgtcctgactcaataacgccaaattcaaatcaaaagagagtactaagtgcctct
ggtcaacgtaaggataatgatggtattactactcagccacagattaagacaaaatatgtg
agtgaggcaactggttaccgaacagcacaccaatcaaacccactctggcagtaccatctt
atcggagggcaggacctgcaacggtatccttcccagcacggcccagggctgtctgtagta
tcaggtccagccccagttatacagcgacctgacctttgtcacccatcaacaaataatcca
ccatcatcaaatagtagcattagtcgagttagttcccatcactcaagttcaaatctgtct
gaggcagcttcgaatgtttctggtcttagatcgaccagatctcaaagaatacgtggcgcc
tccaacaatatccgtcttcgccaaatggaaatgcgcgaaaaccatgccgttgttttcagc
tga
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