KEGG   Ruditapes philippinarum (Manila clam): 132739600
Entry
132739600         CDS       T09557                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL2-like
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    132739600
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rphi01009]
    132739600
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rphi03021]
    132739600
Protein phosphatases and associated proteins [BR:rphi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     132739600
Transcription machinery [BR:rphi03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     132739600
    Little elongation complex (LEC)
     132739600
SSDB
Motif
Pfam: ELL Occludin_ELL Mt_ATP_synt
Other DBs
NCBI-GeneID: 132739600
NCBI-ProteinID: XP_060583329
LinkDB
Position
Unknown
AA seq 541 aa
MAALEEGFQYGLSSNSISTSNRSVVQVKLTDTSLRIIEEYLRRKPSCTQKPCIQFQGNQG
SIQIPEGGDSLRTFHFSLSAIQGDPNGSFDAVCQTSSRNGKPLVLEGSMTNKIQIHATNE
LFKATKDRVTQAELDSKKVSTKEYKPNGPHMSRKKTTVIRNPHPSVTARHQPVQPSKPKP
STAPPVNFSKRPSPSYGSHGHAVSPHNPATSSKPTSPSLSSHNSGPAKTVGNPAVMSMPY
RDRIIHLLAIRPYKKPELIIRLRKDGVREKDKDQLGTVLNQVAVAKDNSFTLAKHIYAEV
RSDWPFYTDEDRLILKKKLQSASTVSPSASPNSRSPDSQSANLTQKKSEPLKRSIEDSHQ
TMHHNAKKKRISLYDKNGHKSENRSSSTDRHSSNSSSNNNSNNVSSTTDISDKKENIDDT
VDSTSDTPEYVRQYHTIADDDQRYKYKQAFNEEYKEYRELHSSIDLVSQKFCEMQELRRK
TQKGTSEYQNLEEKIRNQYMLQKSDPKFIEQMKRYKYLHNKLAYIKNLIMDYDQKIVTVS
S
NT seq 1626 nt   +upstreamnt  +downstreamnt
atggctgcactggaagaagggtttcaatatggtctctcttcaaattcaatttctacttca
aatagaagtgtagttcaagttaaattgacagatacctcattgcgaataatagaggaatat
ttacggagaaagccttcatgtacacagaaaccatgtatacagttccaaggaaaccaaggg
agtatccaaataccagagggcggggacagcttaagaacgtttcatttctccctctcagca
atacagggcgaccctaacggaagttttgatgcagtctgccagaccagttcaaggaatggt
aagccgcttgtattagagggcagtatgacaaacaagattcaaatccatgccaccaatgaa
ttgttcaaagctacaaaagatagagtgacgcaagcagagttagacagtaaaaaagtcagc
accaaagagtacaaacccaatggacctcatatgagccggaagaagacaacagtaattcgt
aacccacatccttccgttacagccagacatcagccagtacaaccgtcaaaaccaaagcct
tctacagcaccccctgttaactttagcaaacgaccttcaccctcgtatgggagtcatggt
catgctgtatcgccacacaatcctgctacgtcatccaaacctacatcaccaagtctgtct
tctcataattcaggtcctgctaaaactgtgggaaacccagctgttatgtcaatgccatac
agagatcggataatacatcttctggctatacggccctacaagaagccggagcttattata
cgacttagaaaagatggagtgcgggaaaaagacaaggatcagctgggcactgtactgaat
caagtggcagttgccaaagataattcatttacgctagccaaacatatatacgcagaagtt
cgctcagactggccattctacactgatgaagatagacttatattgaaaaaaaaattacaa
agtgcctcaactgtgtctccatcagcctcacctaacagtcgcagtcctgacagccaatca
gctaatctcacacaaaagaaatctgaacctttgaagcgatctatagaagatagtcaccaa
acgatgcatcataatgcaaagaagaaacgtatctcattgtacgacaaaaacggacacaaa
tcagagaatcgttcaagtagtacggacagacacagtagtaatagtagtagtaataataat
agcaataatgtatcttccacaacagatatatcagataaaaaagagaatattgacgatacc
gttgattccacttctgatactcctgaatatgtaaggcaatatcatactatagcagacgac
gaccagaggtataaatataagcaagcatttaatgaagagtataaggaatatcgggaactg
cattctagtatagatcttgtctcgcagaaattttgtgagatgcaagaattgagaaggaaa
actcagaaaggcacatcagaatatcagaatctggaggaaaaaatccgcaatcagtatatg
ttacaaaaaagtgatccaaagtttatagaacaaatgaaaagatacaagtaccttcataat
aagctggcttatattaaaaatcttatcatggactatgatcaaaagattgtgacagtgtca
tcttag

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