Ruditapes philippinarum (Manila clam): 132740169
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Entry
132740169 CDS
T09557
Name
(RefSeq) ATP-dependent RNA helicase DDX19A-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03013
Nucleocytoplasmic transport
rphi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132740169
03015 mRNA surveillance pathway
132740169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132740169
Enzymes [BR:
rphi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132740169
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
132740169
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
132740169
NCBI-ProteinID:
XP_060584005
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MADDWGAIVDEQEKNITQKVGGLNIAAGTSASSGDKAEGSTTVTQPSDSQVASASGGATG
GPTAGATAGAGDSASPKKESGAAGEEEESSASKEEESLLRKLLHSKLVSTKADLEVLQKD
PNSPLYSVKSFEALNLKPELLKGVYEMGFNAPSKIQETALPTLLADPPTNMIAQSQSGTG
KTAAFVLTMLSRVDPNFPHTQCLCLAPTYELALQIGDVTERMAKHMKNVKIGYAVKGERI
ARGQKSLDHILIGTPGTVSDWCTKFKSIDPRKLTVFVLDEADVMIATQGHQDQSIRIQRQ
LSKTCQMLLFSATYDDEVMKFAQAVIPNNPVVIKLRRDEESLDNIRQFYVQCRDQEDKFQ
ALSNIYGAISIGQSMIFCATRRTAHWLSEKMTKDGHAVALLSGDLEIAQRAAIINRFRDG
KEKVLITTNVSARGIDVEMVTVVVNFDLPILQESKMADCETYLHRIGRTGRFGKAGLAIN
MIDSNKSLQVMKAIEKHFNRTIHKLNADDIEEIEKIST
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgattggggagctattgttgatgagcaggaaaaaaatataacccagaaggtt
ggaggtttaaacatcgcagctggcacctcagctagtagtggagacaaggctgaggggagc
actactgtgacacaaccatctgactcccaggttgcatcagctagtggcggggctacagga
gggcccacagcaggggctacagcaggagcaggagattctgcctcacctaaaaaggagtca
ggagctgcaggagaagaggaggaatctagtgcctcaaaagaagaagaatcattgctaagg
aaactgcttcattcaaagcttgtatcaacaaaagctgatctagaagttttacagaaagac
ccaaactcacccttgtattcagtaaaatcatttgaagccttaaatctaaaacctgaactg
ttaaaaggggtgtatgagatgggattcaatgcaccatcaaaaatacaagagacagcttta
ccaacattacttgcagacccaccaaccaacatgatagctcaaagtcagagtggtacggga
aaaacagctgcgtttgtgttgaccatgttgagtagagtagatcccaatttcccacataca
cagtgtttatgtttggccccgacatatgagctagctcttcaaataggagatgtcacagaa
agaatggctaaacatatgaaaaatgtcaagattggctatgctgtgaagggtgaaagaatt
gcaagaggacagaaaagtttagatcacatattgataggaacaccgggaacagtgtcagat
tggtgtacaaaattcaaaagtatcgaccctcgaaagttgacagtgtttgtcctagatgag
gcggatgttatgatcgcaacacaaggccaccaagatcaaagtattcgcatacaaagacag
ttatcaaaaacgtgccagatgttgttattttcggccacatatgacgatgaagtcatgaag
ttcgcacaagcagtgataccaaataatccagttgtgataaagttacgacgagacgaggag
agtttagataatatcagacaattttatgtacagtgtcgcgatcaggaagataaattccag
gcattatcaaacatttacggagcaatatctataggtcaatcaatgatcttttgcgctacg
agaaggacggctcattggttatcggaaaagatgacaaaagacggccatgctgtagcgtta
ttatctggcgaccttgagattgctcagagggcggccattataaatcggttcagggacggc
aaggagaaagttcttataacaacaaacgtgtctgcccgaggaatcgatgtggagatggta
acagtcgtggtgaactttgacctcccaatcctccaggagagtaaaatggctgactgcgag
acctacctacataggataggacgaacaggaagatttggcaaagctggtcttgcaatcaac
atgatcgactccaacaaatccctccaagtaatgaaagcaatagaaaaacatttcaatcgt
acaattcataagttaaatgcagacgacatcgaagaaatcgagaagatcagtacctga
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