Ruditapes philippinarum (Manila clam): 132740236
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Entry
132740236 CDS
T09557
Name
(RefSeq) 5'-3' exonuclease PLD3-like
KO
K16860
phospholipase D3/4 [EC:
3.1.4.4
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00564
Glycerophospholipid metabolism
rphi00565
Ether lipid metabolism
rphi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
132740236
00565 Ether lipid metabolism
132740236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132740236
Enzymes [BR:
rphi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
132740236
Membrane trafficking [BR:
rphi04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
132740236
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PLDc_3
PLDc_2
PLDc
Podoplanin
Motif
Other DBs
NCBI-GeneID:
132740236
NCBI-ProteinID:
XP_060584080
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MKTQDDKENLFDVKKKEEKWKLVVLIVGIIVLVLAFVTVIGVVIYIITDRYSADNHPDID
LKCDTNNDACIYTMVESIPENLTYNAGEPSHPSTFSGIQDIISKAESTIEIASFYWTMRP
NDLPVTDPSSWQGEQLFNDLVFAGKEKGIKIRIVQSYSKKPINDTLYLAKEAGAEVRSLD
FDRLLHSGILHTKMWLVDRKHFYLGSANLDWRSFTQVKEMGSLVRNCDCLAADIGKIFDA
YWYLATPDSSIPSSWPPEYNTMYNMSSPMIVNFNGTKYNTFLSSSPPPICPSGRSQDGST
IVQIINNAKSYVHIAVMDYFPTTQFSHPRIYWPDIDDAIRSAAFNKHVNVRLLFSYWNHT
WPEMLIYLRSLQALQYSSKYVNVNIEVRLFVVPAFTDAQRNIPYGRVNHNKYMVTDKTAY
IGTSNWSGDYFITTGGIGLVIDGSNQGNQNDIRAQLAAVFERDWNSQYAKPLNHFNSTLT
HT
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagactcaagacgataaagagaatttgtttgatgttaagaagaaggaagagaaatgg
aaactggttgtgttgattgtaggcattattgtcctagtgttggcttttgtcacagtgatt
ggcgttgttatatatataataacagatagatatagtgctgataatcacccagatatagat
ttaaaatgtgacacaaacaatgatgcctgtatatatactatggttgaaagtataccagaa
aatttaacatataacgctggagaaccttcacacccatcaacattctctggtatacaggat
attatatcaaaggcggagagtactatagagatagcaagtttctactggacaatgagacct
aatgacctaccagtcactgacccttcctcttggcaaggtgaacagttattcaatgatcta
gtgtttgctgggaaagagaaaggaataaagataagaatagttcagagttattcaaagaaa
ccaatcaatgacacactctatctagctaaagaggctggagctgaggtgcgcagtttagat
tttgacagactgttacatagcggaatacttcatactaaaatgtggttggtggacaggaaa
catttttaccttggtagcgcaaatcttgattggagatcatttacacaggtaaaagagatg
gggtctttagtaagaaattgtgattgtctagctgctgatatagggaagatatttgatgct
tactggtacctggcaacaccagattctagcattccatcgtcatggccaccagaatataac
accatgtacaatatgtcatcaccaatgatagtcaactttaatggaacaaagtacaacaca
ttcctgtctagttcaccaccaccaatatgtcctagtggtcggtctcaggatggaagtact
attgtacagatcataaataatgccaagtcatatgttcatatagcagtgatggattatttc
cctactacacaattctcacatcctagaatatactggccagatatagatgatgccattagg
tctgcagcattcaacaaacatgtaaatgttagactattatttagttattggaatcataca
tggccagaaatgctcatctatttaagatcactccaggctctgcaatacagctctaaatat
gtaaatgtcaacatagaggtgagattatttgtagtaccagcatttactgatgctcagaga
aacattccatatggcagagttaaccataacaagtacatggttactgataaaacagcttac
atagggacatcaaactggtcaggtgattattttattacaactggaggtataggactggtt
atagatggcagtaaccaaggcaaccagaatgacatcagagcacaattggctgctgtgttt
gagagagactggaactcacaatatgctaaacctctaaatcactttaactcaacactaact
cacacttga
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