Ruditapes philippinarum (Manila clam): 132740324
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Entry
132740324 CDS
T09557
Name
(RefSeq) tubulin alpha-2/alpha-4 chain-like
KO
K07374
tubulin alpha
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04145
Phagosome
rphi04517
IgSF CAM signaling
rphi04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
132740324
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
132740324
09142 Cell motility
04814 Motor proteins
132740324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132740324
03036 Chromosome and associated proteins [BR:
rphi03036
]
132740324
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rphi04812
]
132740324
04147 Exosome [BR:
rphi04147
]
132740324
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132740324
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
132740324
Cytoskeleton proteins [BR:
rphi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
132740324
Exosome [BR:
rphi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132740324
Exosomal proteins of other body fluids (saliva and urine)
132740324
Exosomal proteins of colorectal cancer cells
132740324
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
132740324
NCBI-ProteinID:
XP_060584183
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MRECISVHVGQAGCQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVEGEGEEEEGDEY
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaatgtatatcagtgcatgttggtcaggccgggtgccagatgggcaacgcctgt
tgggagctgtattgtctggagcacgggattcagcccgacggtcagatgccaagtgataaa
actattggtggtggagatgattctttcaacacgttcttcagtgaaaccggggctggtaaa
catgttcctagagccgtctttgtggatctcgaacctaccgtcgttgatgagattcgaacc
ggaacctaccgccaactatttcaccccgagcaactaataaccggcaaagaagatgcggcc
aacaattatgctcgtggtcactacaccattggtaaggaaatcatcgatcttgtcttggat
agaatacgtaaactagctgaccaatgtacaggcctgcaagggtttctgatcttccactca
ttcggtggtggtactggatctggcttcacatccctgctaatggagcggctatctgttgat
tatggaaaaaaatctaagcttgagttcgctgtttatcctgccccccaagtttcgacagct
gtcgtggagccatacaactctatcttgaccactcataccactctagagcactccgactgc
gcgtttatggttgataacgaggccatctatgatatttgtcgccgtaaccttgacattgag
aggccaacgtacaccaacttgaatcgactgattggtcagatagtttcgtcaattaccgca
tctctcagatttgatggtgcccttaacgttgacttgacagagttccaaaccaaccttgta
ccatatccacgtatccactttccattagctacctacgcaccggtcatctccgctgagaaa
gcatatcatgaacaactcaccgttgctgagataacgaatgcttgttttgaaccagctaat
cagatggttaaatgcgatcctcgtcacggcaagtacatggcttgttgtatgttgtacaga
ggagatgttgtcccgaaagatgttaatgctgcaatcgctacaatcaaaactaagagaacc
atccaatttgttgattggtgtcctactggcttcaaggttggtatcaactaccaaccgcca
acagtggtacctggtggagatcttgcaaaggttcaacgtgcagtatgcatgttgagcaat
acgaccgctatcgccgaagcctgggcccgtcttgaccacaagtttgatttgatgtacgct
aagagagcgtttgttcactggtatgttggagaaggaatggaggaaggagagttctctgag
gcccgtgaggacttggccgccctcgagaaagattacgaggaggttggggttgattcagtt
gagggggaaggagaagaagaagaaggagatgaatattaa
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