Ruditapes philippinarum (Manila clam): 132740372
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Entry
132740372 CDS
T09557
Name
(RefSeq) spectrin beta chain-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04517
IgSF CAM signaling
rphi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
132740372
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
132740372
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rphi04812
]
132740372
Cytoskeleton proteins [BR:
rphi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
132740372
Intermediate filaments
Intermediate filament-binding proteins
132740372
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
DUF2498
Motif
Other DBs
NCBI-GeneID:
132740372
NCBI-ProteinID:
XP_060584237
LinkDB
All DBs
Position
Unknown
AA seq
2445 aa
AA seq
DB search
MTEVDNMPSTGVRWESGQIEDDFEGGNNSAKLFERSRIKALADERESVQKKTFQKWVNSH
LARIGCRINDLYIDLRDGKMLMKLLEILSGERLPRPTKGKMRIHCLENVDKALTFLHEQR
VHLENMGAHDIVDGSNRLTLGLIWTIILRFQIQDITIEEADNSETKSAKDALLLWCQMKT
AGYPNVNVRNFTTSWRDGLAFNALIHKHRPDLIQYDKLQKSNAMYNLQNAFQVAEEKLGI
TPLLDPEDVNVEFPDEKSVITYVVTFYHYFSKMKAETVQGKRIGKVIDNALDTERNVEDY
ETLTSDLLEWIEQTIMILKDRQFSNSLSGVQQQLTAFNLYRTSEKPPKFVEKGNLEIMLF
TLQSKMRANNQRPYFPVEGKLISDINKAWDKLEKAEHERELALREELIRQEKLEQLAQRF
DRKAGMRETWLSENQRLVSQDNFGYDLAAVEAATKKHEAIETDINAYEERVQAVVAVAEE
LEAENYHDIDRINARKDNVIRLWNYLLELLRARRMRLELSLQLQKIFQEMLYILDWMEEI
KSRLMSEDYGKHLMGVDDLLQKHSLLESDIHVLGERVKTVNLQANKFVDGDFSEVGGYRP
SDPEIVKDRINTLENAYEELRRLADDRKGRLNESRKLWQFYWDMADEEGWIREKEQLMSA
PDLGHDLTSVHLLLHKQKTMEDEMTARHTHLQSVLQVGNDLISAGNFGAEKIQERIDEIN
EQWESLIDLAAFRKKRLNEAVDFYQFFADADDIDTWMHDTLRLVSSDDVGRDEASVQSLL
KKHKDVTDELKNYQSVIEALHEQAANLGEQDRESESVQTTLDSIDRRYQELLELAKLRKQ
RLLDALSLYKLFNEADSVVTWIDEKEKLLTTMIITDDIEELAIMKHRFEGFEHEMNANAS
KVGVVNQLARQLLQVEHPNATEVIQRQNDLNQSWNNLRELVEAKRDEIDGAHGLQNFHIE
CNETISWIHEKAKIIESTEELGNDLTGVMTLQRRLSGMERDLAAIQAKLESLQGEAERLE
EEKPDEAEAIREKIAEISSVWVNLKDMLKDRDEKLGEAGELQRFLGNLDHFQQWLSRTQT
TVASEDAPNSLADAERLLNQHQQLKDEIDAYVPEYAKMKDFGDRVTEGQTDPQYMFLAQR
LNALDDGWKELLQMWDSRQQGLSQDLNLQMFLRDAKQAEVLLNQQETFLSKEDVPNTLEA
AENLIKHHEAFITTMDANDEKINAVLTFANRLMEDNHYANDKIHKKAENINERRNTNRQR
ADEQLERLKDQLLLQQFLQECDELRDWLHDKMADAEDETYRDAKNLHSKYLRHQAFEREI
NANKDRLMRLQEAGEQLMAEKPETREQIEPILSSLSTQWDELECTTTAKADKLFENKRAV
LYEQSCDDIDGWVTQLETQIIQAESAKDLTTVNLLMKNQNQLENQMKLKEQQVKELDEQM
VHVKKIEPEKESIIEARKAAVAERFAKIQEPLVKRREQLEKVKFIHQFVRDVEDEKLWIE
EKMPQATSKDFGNSLLTVQLLEKKNQSLQTEIDNHEPRISSLVETGENLISEGHPQSEEF
RALIDDLINRWQALKDALEQRKERLQLSDTAQQYYYDASEAEAWMSEQELYMMGEERAKD
EIGAQNMMKKHQALEYVVEDYANVVRQLGEQSRALINQDHPESDQIAVRQSQVDKLYAGL
KDLAQERRSKLEEVLKLYMLSHEIEDLMQWIAEREIVASSHELGHDFEHVTLLKERFQEF
SRDTISIGTERVAAANQTCDNLIALEHSDSATIAEWKDTLNERWEDLLELIETRQQELQA
SWERHKFFSDCKETLEIIYEKQNYIPEELGRDAQSVAALQRKHANFEQDLVTLDSQVQAI
QEESARLQCGYAGDKAREIHDQEQEVLDAWRNLHKMVETRRMKLANASDLYRFFNMVRDL
LLWMDDIIRQMNTQEKPRDVSGVELLMNNHQSLKAEVDAREENFTICINLGKDLLDRKHY
RSDEVREKLIDVTKKRQGMVDQWETRWEYLQLILEVYQFARDAAVAEAWLIAQEPYLMNQ
ELGDTLDAVENLLKKHEAFEKSAATQEERFAALEKLTTFEMKERKKAEEESPEDVLRAKE
EKLQRLIAEFLPPEEPPTPEPEPEVPASPEEQKQEEEPIVAEAQKEAEALIQSDTTVSTP
TVWDVELEPRSVPPVLSEPIKQPDPQIVEESPARGHPSARLIRREEKGATTVVSSEPPPT
SPRERKDEVTPKSSRRSGSRTDVTPDSSSRKGSKSDVRGSPKSGRRSSPRTSRHRDPSDP
MARGDASTPRKSPAAGPSTVHEEGNLSRKHEMEGPMKKASNRSWDKVYVVVHGPALSCYK
DQKHAKQDPSSLIHHETAMDLNGAECEPAVDYNKRPNVFRLRLASGGEYLFMAKDQSEMD
RWMGVINSTASKGGAAPTRSQTMPARTDEPKDSAKKKGFLTFKKK
NT seq
7338 nt
NT seq
+upstream
nt +downstream
nt
atgacggaagtggacaatatgccctcaacaggggtccgctgggagtccggacagattgaa
gatgactttgaagggggaaataactcagcaaaactatttgaaagatcaagaatcaaggct
ttagctgatgagagagagtccgtacagaagaaaacctttcagaaatgggtgaactctcac
ctggcccgaattgggtgtcgaatcaatgacctttatattgaccttcgtgatggcaagatg
ctcatgaaattgcttgagatcctctcaggggaaagactgccaagaccaacaaaaggaaag
atgcgaatccactgtttggagaatgtggataaagccctcacatttttacatgaacagcgt
gtacatttagagaacatgggagcccacgatatcgtagatggtagtaacagactcacactt
ggtctcatatggaccatcattttaagattccagattcaagacattactatagaggaggcc
gataatagcgagaccaagtcggccaaggatgcattgttgctatggtgccaaatgaaaact
gccggataccccaatgttaatgttcgcaacttcacaactagttggagagacggtcttgca
ttcaacgctctcattcacaaacacagacctgacctcattcagtatgataaactacagaag
tctaatgctatgtacaacttgcagaatgctttccaagtggctgaagaaaaacttggcatt
actccacttctggaccctgaagatgtcaatgtggaattccctgatgagaaatctgttatc
acctatgttgtcacattctaccactacttctccaagatgaaggctgagactgtacagggc
aaacgtattggaaaggttattgacaatgccctcgatactgagaggaacgttgaggattat
gagactttgacctctgacctccttgaatggatcgagcagacgatcatgatcctgaaagat
cgtcagttttccaactccctcagtggcgtacaacagcaactcacagcattcaacctgtac
agaacctcagaaaaaccacccaagtttgtagagaagggtaacttggagataatgttgttc
acattacaaagtaagatgcgcgctaacaaccagcgaccatactttcctgtagagggaaaa
cttatctctgacattaacaaggcctgggacaaactggagaaagctgaacatgaaagggaa
ctcgcactcagagaggaactcatcagacaagagaaacttgaacaactagcacaaagattt
gaccgcaaagccggcatgcgtgaaacctggctaagtgagaatcaaagacttgtttcacaa
gacaacttcggctatgacctggctgctgtagaggcggcgaccaagaaacatgaagccata
gaaactgacattaacgcgtatgaagagcgcgtacaggcagtggtcgctgtcgctgaagaa
ctagaagcagaaaactaccatgatatagacagaattaatgcaagaaaagacaatgtaatc
cgattatggaactatctattggagttattacgggctagaagaatgagacttgagctctcc
ttacaactacagaaaatcttccaagaaatgttatatatactcgactggatggaagaaatc
aagtcccggttgatgtcagaagattacggaaaacatcttatgggcgtggatgacttgctc
cagaaacacagtttattggagtcagatatccatgttcttggtgaacgtgtcaagacagtt
aatcttcaggcaaacaaatttgtagatggagacttctcagaagttggaggctaccgacca
agtgacccagagattgttaaagatcgcattaatacactagagaatgcatatgaagagcta
cgcagacttgccgatgatcgtaaaggacgtctcaacgagtcccgcaaactgtggcagttc
tattgggatatggctgacgaggagggctggatacgagagaaagaacagctcatgtccgcc
cccgacctgggtcatgaccttactagtgtacatctccttcttcacaaacagaagacaatg
gaggatgagatgacagctagacacacccatctgcaatccgttctacaagtgggtaatgat
ctcatttcggctggcaatttcggcgcggagaaaatccaagagcgcattgacgagatcaac
gagcagtgggaaagcctcattgacttggcggccttcaggaagaagcggcttaatgaagct
gttgacttctaccagttcttcgctgatgctgatgacattgatacatggatgcacgacaca
ttacgtcttgtatctagtgacgatgttggacgtgacgaggcgagcgtacagtcactcctc
aaaaaacacaaggatgtgacagacgagctgaagaactaccagagtgtcatagaagccctt
catgaacaggctgcaaacttaggagagcaggatcgtgaatctgagtctgtacagacaaca
ttagatagtattgaccgacgctatcaggaacttttggaactggccaaactcagaaaacag
agactactggatgctctgtccttatataaactcttcaatgaagctgacagtgttgttaca
tggatagatgagaaggagaagcttctcactactatgattatcacagatgacattgaagag
ttggccatcatgaaacatcgtttcgaaggtttcgagcatgagatgaatgcaaacgcgtcc
aaggtgggcgtagttaaccaactagctagacagttactgcaagtggaacatccaaatgcc
actgaggtgatccagagacagaatgatcttaaccagagctggaacaacttgagagagctt
gttgaggctaagagggatgagattgatggtgctcatggtctacagaacttccatattgaa
tgtaatgagaccatcagctggatccacgagaaggcaaagatcatagagtctacagaagaa
ctcggcaatgacctcactggtgtgatgacattgcagcgtcgccttagtggtatggagcgt
gaccttgcagccattcaggccaaactggaatccctacaaggcgaggctgaacgtctcgag
gaggagaaaccagatgaagccgaggcaatcagagagaagattgccgagatcagcagtgtt
tgggttaaccttaaagacatgttgaaggaccgtgatgagaaacttggagaggcaggagaa
cttcagcgcttccttggaaatcttgatcacttccagcaatggttgtctcgcacacagacc
accgttgcctcagaggatgcccccaacagtctcgctgatgcagaaagacttcttaaccag
catcaacaacttaaagatgaaattgacgcatacgttccagaatacgctaagatgaaggac
tttggagatcgtgttactgaaggacaaactgatccacagtacatgttccttgctcagcgt
ttgaatgcattggatgatggctggaaagagttgttacagatgtgggacagtcggcagcaa
ggcttgtcacaggatctcaacttacagatgttcctgagggatgccaagcaggctgaagta
ctactgaatcaacaagaaaccttcctgtctaaggaagatgtacctaacacattagaagca
gcagaaaacttgataaaacatcatgaagcgtttattaccaccatggacgcgaacgatgag
aagattaacgctgtacttacattcgctaacagacttatggaagacaaccactatgctaat
gataaaatacacaaaaaagcagaaaatattaatgaaaggaggaatacaaatagacaacgt
gcagatgaacagctggagagacttaaggaccaacttctactccaacaattccttcaggaa
tgtgatgagttacgagactggttacatgacaagatggccgatgccgaggacgagacttac
agagatgctaagaatcttcacagtaaatacctgcgtcatcaagcatttgagagagagatc
aatgctaataaagacaggctcatgagattacaggaggctggtgagcaattgatggctgag
aagcccgaaactcgtgaacagattgagccaatcctgtcgagtctctccacccagtgggac
gagcttgaatgtacgaccactgccaaagccgacaaactgtttgagaacaagagagctgtg
ctgtatgaacagagttgtgatgatattgatggctgggtcacgcagctagagacacagatc
attcaagcagagtcggcaaaggatctgaccacggtcaatctactcatgaaaaaccagaat
caattagaaaaccagatgaagttgaaggaacaacaagtaaaggaacttgatgaacagatg
gtgcatgtgaagaagattgaaccagaaaaagagtccatcattgaggctaggaaagcagct
gttgctgaaaggtttgctaagatccaagaaccgttggtgaagagacgtgaacaattagag
aaggtgaaatttatccaccagtttgttcgtgatgtggaagatgagaagttgtggattgag
gagaagatgccacaagcaacatctaaagactttggaaatagtctcctcactgtacaactg
ctggagaaaaagaaccagtctttacagacggaaatagacaaccatgaaccaaggattagc
tcccttgttgagactggtgagaacctgatcagcgagggtcatccacagtcggaagagttc
agggccctgattgatgatcttatcaacaggtggcaggcattgaaagatgccctcgaacag
aggaaagaaagattacaactctcagacactgcccaacagtactattatgatgcgtcggag
gcagaggcatggatgagtgaacaagagttgtacatgatgggcgaggagagagctaaggat
gagatcggagcccagaacatgatgaagaaacaccaggcacttgaatatgtagtagaggac
tatgctaatgttgtaagacagctgggagaacagagtagagctcttattaaccaagatcat
ccagagagtgatcagattgcagtaagacagtcacaggttgacaaattgtacgcaggtttg
aaggatctcgcccaggagcgtcgcagcaaactggaagaggttctcaaactgtacatgctg
agtcacgagatcgaggatctcatgcaatggatcgcagagagggaaattgtagccagctca
catgaacttggacatgatttcgaacatgttactttacttaaggaaagattccaagaattt
tcgcgagacacaatatcgataggaaccgagcgagtggcagcagccaatcagacttgtgat
aatctgatagccctagagcactccgactctgccacgatcgctgaatggaaagacacgctg
aatgaacgatgggaggaccttcttgagttgattgagactagacaacaagaactacaggct
tcttgggaacgtcacaagttcttcagcgattgtaaagaaactctagaaatcatatatgaa
aagcaaaattatatcccagaagagcttggcagagatgcacaaagtgtggctgccttacaa
agaaaacatgccaactttgaacaagatctggtcactcttgactcacaggttcaagcaata
caagaggagtctgctcggttacaatgtggttacgctggcgacaaggcacgggagatccac
gatcaggagcaagaagtgctggacgcatggagaaacctacacaagatggttgaaacacga
agaatgaaacttgctaacgctagtgacctttacagattctttaacatggtcagagatcta
ctactctggatggatgatatcatacgacagatgaacacacaagaaaagccgagagatgtg
tctggtgttgagctattaatgaacaaccatcagagtttgaaggcagaggttgatgcaaga
gaagagaatttcactatctgcataaaccttggcaaagatttacttgatagaaaacattat
agatctgatgaggttagagaaaaattaatagatgtaacaaagaaacgacagggtatggta
gatcaatgggaaacaagatgggaatatttacaattaatattagaagtataccagtttgct
agggatgctgctgtggcagaagcctggttgatagcacaagaaccatacctaatgaaccaa
gaattaggggacacattagatgctgtagaaaacttgttgaagaaacacgaagcatttgaa
aaatctgcagccacacaagaagaaagatttgctgcactagaaaaattaacaacgtttgag
atgaaggaaagaaagaaggcggaagaggaaagcccagaagatgtgttaagagcaaaggaa
gaaaaattacagcgtttaatagctgaattcttacccccagaggaacccccaaccccagaa
cctgaacccgaagtacccgcaagcccagaagaacaaaagcaagaggaggagcccattgta
gcggaggcccagaaagaggctgaagccctaatacagtcagatacgacagtatccactccc
accgtctgggatgtagaacttgagcctcgctcagtgccgcccgttctttctgaaccaata
aaacagcctgatcctcagatagtagaagaatcaccagctcggggccatccgtcagctagg
ctaatacgtcgagaggaaaaaggtgctactactgtagtttcttcagaacccccgcctact
tcaccgcgcgagagaaaagacgaggtgacccctaaatcctcccgaaggtcagggtcaagg
acagatgtgacccctgattcatcttcaagaaaaggttcaaaatcagatgttaggggttca
ccaaagtcaggccgaaggtcgtcgccccgtacttcccgccatagggacccttcagaccca
atggcccgaggggacgcctccactcctaggaaatctccggcagctggtcctagtacggta
catgaggaaggcaacctgagcaggaaacatgagatggaaggacccatgaagaaagctagc
aacagatcctgggacaaagtatatgtggttgtgcatggacctgcactctcgtgttacaag
gaccagaaacatgctaaacaggatccaagttcactcattcaccatgagacagcaatggat
cttaatggtgccgagtgcgagcctgccgtagactacaacaagagacccaatgtgttcaga
cttcgacttgctagtggaggggaatatctcttcatggccaaagatcagtctgaaatggat
cggtggatgggagtaataaacagcacagcttcaaaaggcggcgctgcccctacccgatca
cagaccatgcctgccagaacagatgaaccaaaagattccgcaaagaagaaaggatttcta
acttttaaaaagaaataa
DBGET
integrated database retrieval system
