Ruditapes philippinarum (Manila clam): 132740454
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Entry
132740454 CDS
T09557
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase E-like
KO
K09564
peptidyl-prolyl isomerase E (cyclophilin E) [EC:
5.2.1.8
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132740454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rphi03041
]
132740454
03110 Chaperones and folding catalysts [BR:
rphi03110
]
132740454
Enzymes [BR:
rphi01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
132740454
Spliceosome [BR:
rphi03041
]
Complex B
Other components
Prp19-related factors
132740454
Complex C
132740454
Chaperones and folding catalysts [BR:
rphi03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
132740454
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
RRM_1
RRM_7
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
132740454
NCBI-ProteinID:
XP_060584336
LinkDB
All DBs
Position
Unknown
AA seq
306 aa
AA seq
DB search
MASNSKRMVYVGGLSEEVDEKILHAAFIPFGDVTDINVPLDYETEKHRGFAFIEFELAED
AAAAIDNLNDSELFGKTIRCNLAKPMKVKEGHAKAVWSEDTWLQEHAGETVTSEDKENTS
QSPTKRQAQTDTDDEPAGKRSRTSSQVFFDIKIGNKQSGRIVIQLRPDVVPKTAENFRCL
CTHEKGFGYKGSSFHRVIPSFMCQGGDFTNHNGTGGKSIYGSKFEDENFTLKHTGPGTMS
MANSGPNTNGSQFFICTEKTDWLDNKHVVFGKVIEGMDVVRKIEKCGTKSGKPTDKVNIV
NCGELV
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaaacagcaagcgtatggtgtatgtcggtggactgtcagaagaagtagatgag
aaaattctgcatgctgcatttattccatttggtgatgtgacagacataaatgtcccactg
gattatgagacagagaaacacagaggatttgcatttatagagtttgaactagcagaggat
gctgcagctgcaatagataacctgaatgattccgagttgtttggtaaaacaatcagatgc
aatcttgcaaaacctatgaaagtgaaggaaggtcatgctaaagcagtgtggtctgaagat
acatggttacaagagcatgctggggagacagtaactagtgaagacaaggaaaacacctca
caatccccaacaaaacgacaggcacaaacagatactgatgatgagccagcaggtaaaaga
tctcggacaagttcacaagtgttctttgatataaaaataggaaacaaacaatcaggaaga
attgttatacagttgagaccagatgttgtgccaaaaactgcagaaaatttcagatgttta
tgtacacatgagaaagggtttggttacaaaggcagttcattccacagagttataccttca
tttatgtgccaaggtggagattttacaaaccataatggaacaggtggaaaatctatatat
ggttctaaatttgaagatgaaaactttactttgaaacacacaggaccaggtacaatgtca
atggcaaattcaggaccaaatacaaatgggtcacagttttttatatgtacagagaaaact
gactggctggacaataaacatgttgtttttggaaaagtgattgaaggaatggacgttgta
aggaaaatagagaaatgtggtaccaagtccgggaaaccaacagataaagttaacattgta
aactgtggagagctggtttga
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