Ruditapes philippinarum (Manila clam): 132740603
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Entry
132740603 CDS
T09557
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 1-like
KO
K03260
translation initiation factor 4G
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132740603
03012 Translation factors [BR:
rphi03012
]
132740603
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
132740603
mRNA cycle factors
Stress granule specific factors
132740603
Translation factors [BR:
rphi03012
]
Eukaryotic type
Initiation factors
eIF-4
132740603
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
MA3
W2
eIF4G1-like_eIF4E-bd
eIF_4G1
Motif
Other DBs
NCBI-GeneID:
132740603
NCBI-ProteinID:
XP_060584525
LinkDB
All DBs
Position
Unknown
AA seq
1574 aa
AA seq
DB search
MNGNRIKTSTSPPLQVPGQSQQRNIYPFVEEFQPQNFQQSGYSQPSQHQYSVQQLGVQAS
NYEIGKPGFSAPRMTSPGLGQQQQTNMYQQQTQQQGMRPSAPFFQTNQQNMNMRPQRYPS
PGNPQSLMYGGPQMIYMGGGQFPGQQPIIMNAANMIPQQRMPNPQYNPGGMPSNPTGYIH
QIPPQQTPISTYPQGYGNQPLFMGNTATSQRPPSTQGQAPQQYTKPKGRTIISIVDPNSG
KDLTAEILKTTQSSTEVTGSSDSGSRSTPVGNTEEVSGQSEGSNAIAAQFAAQVAAKLYH
PKDGEGPPSHTPPPSAHQQASLSQGAVPGAMPSGDHAHPATTGSNPVQVVLEQPPVTTPT
QSVHVDSATADNSKTHQSLSNGRPAPPSEVVQTSEVPPVAVVETVTPVDSASNAKKSLET
SEPVTVSVISAPVVSERTNVSEERSDSSSAREITPEVNIVPPTPVEKKPDMKIPEISDEP
TKTEEPTAEVSVPKKQKSKLKKKDLNKKGDQISGSEFDAYTDTSVSIEPQQPEATPSEPE
VSEPVEETPEPSVPEEPVTEVTTEPSKTPSPTPTDDIVPKVEIKIEDGDAELEEGEIVDD
EDEDAMSMGLRYKYSEEQWSPLNPEGKKHYDREFLLQFQNEYSAVQKPAGLPDIPDIILD
KPQGMGRQFSRELSGGSSGGQDFIDFTPKYVWGGGGGGGGGQKSRGLPRQPSNQKNKSGP
PPRHINLSISKDIELHKAKEAWKPSHSDAKKEAEEDEAKNAELYKKTRSILNKLTPQKFQ
TLVTQMQSLPIDSESKLKGVIDLVFEKAISEPSFSVAYANMCRCLSMSKVQSESKPGEMV
NFRAVLLTRCQREFEKDKSSEAGFLVKREEIEKAEDGAKKEELKQELAYEESKAKRRSLG
NIRFIGELFKLKMLTENIMHDCVFKLLRTKDPENLECLCRLLTTIGKELDVDKAKPRMDQ
YFQQMGKIVNEKKTSSRVRFMLQDVMDLRTNKWVPRRVDNNPKTIDQIHKEVAQEAQEKA
LLSQQNQMQQRSQRGGRRGPPDQRGGADGWNTVGANRTPLKSVDRSIDPSKMKLSKQNVD
ESNIQLGPGGGASRFSGWGRGSTGGTTSRPSQEKEKPNTPANRFSALSRPDEEQGRRFGG
VSPARSDSRGRGFGRPPSLGARRSQETERERAVAAAKAIGASQSVEGGHRERSRGRAEPE
PQPTPVQPASTELKVLSEDEMDKKTKAILDEYFAIQDMKEALLCVQELSTQNHHHFVYNA
INHVLERSPQSRKQTGHLLHDLVKKSVISVDNYIKGLVEVLEYAEDLEIDIPKIWQYYGE
LISPMIQDNSVPLSFLKQAAAPLIANNKAGILLAEILHDASQREGHKKVAGLWTSSGLQW
SEFVPKNQVEQFLKDKGLEYTSGGDSAPTTPTTGLPLSEIEVNLQDLIVKKKADNETVFD
WIESNVDDPTTKRAKFIRALMTAVCLSAIKGEKGKERLDPKEISARNDLLQKYLDHQPDS
ELQALYAVQALIAKLEHPQGVLRGMFDTLYDEDIISEDAFFQWEKSEDEPEGKGVCLKQA
IQFFTWLREADEDS
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaaatcgtataaaaacgtccacatcgccacctcttcaagttcccggacagtct
caacaaagaaacatttacccatttgttgaggagtttcagccacagaactttcaacagtct
ggctactcacagcctagtcagcaccagtattctgtccagcaattaggtgtgcaagcctct
aactatgaaatagggaaacctgggttcagtgctcctcgaatgaccagtcctggtttaggc
caacaacaacagacaaatatgtatcaacaacaaacacagcagcaaggcatgaggccaagt
gcgccttttttccaaactaatcaacagaatatgaatatgaggccacagagatatccaagt
cctggaaatcctcagtcgctgatgtatggaggaccacagatgatatacatgggaggaggg
cagttccctgggcaacaaccaattataatgaatgcagcaaacatgattccacaacagaga
atgcccaatccacaatacaaccctggaggtatgccatccaaccctactggatacatccac
cagattccgccacaacagacacctatctctacctacccacaaggttatgggaatcaacct
ttgttcatgggaaacacagcgaccagtcagcggccgccgtcaacacaaggtcaggcccca
caacagtacactaaaccaaaagggagaaccattataagtattgttgatccaaatagtggt
aaagatttgacagcagagatacttaagacaacacaaagttcgacagaagtaactggatct
tctgattcggggtccagaagtacaccagtgggaaatacagaggaagtgtcggggcagagt
gaggggtcaaatgctatagcagcacaatttgcagctcaggttgctgccaaactctaccat
ccaaaagatggagaaggtcctccaagtcatacaccccctccttcagcacaccagcaagca
tctttgtcacagggggcagtaccaggtgcaatgccttcaggtgatcacgctcatccagct
acgactggctcaaacccagtccaggttgtcctggaacaacctccagttaccacaccaaca
caatctgtacatgtagatagtgcaactgcagacaactctaaaactcatcaaagtctttca
aatggcaggcctgctcctccttcagaagttgtccaaacttctgaagtgccacctgtagcg
gtagtggagactgttactcctgtagatagtgcatcaaatgccaagaaatcattagaaacc
tcagaaccagtgactgttagtgttataagtgcaccagttgtctcagaaagaactaatgtt
agtgaagaacgtagtgactctagtagtgctcgtgaaattacaccagaagtaaatatagtg
ccaccaacgcctgttgaaaagaaaccagatatgaaaataccagaaataagtgatgaacca
acaaaaactgaagaaccaacggcggaagtatcagttcccaaaaagcagaaatcaaagttg
aaaaagaaggacttgaacaagaaaggagaccaaatatctggttccgagtttgacgcctac
acagatacatcagtatcaattgaaccacagcagccggaggctacaccaagtgaacccgaa
gtgtcagaaccagtcgaagaaacacccgaaccatcagtgcctgaggaaccagtcacagag
gtaaccacagagccgtcaaagacaccctcgccaacccccacagatgacatcgtacccaag
gtggaaatcaagattgaagatggtgacgctgaattagaggaaggcgaaatagtggatgat
gaagatgaagatgccatgagtatgggactgagatacaagtattcagaagagcaatggagt
cccttgaatcccgagggaaagaagcactatgatagagagtttttgctacagttccaaaat
gagtacagtgctgtgcagaagccagcaggacttcctgacattccagacatcattcttgac
aagccccagggaatgggtcggcagtttagtcgagaattgtctggaggcagttctggtggg
caagactttatagatttcactcccaaatatgtatggggtggtgggggtggtggtggagga
ggccagaagtcacgtggtctacctcgtcaaccaagcaaccaaaagaataagagtggtcca
ccacctcgtcacattaatttgtccatcagcaaggatatagagctacacaaggctaaagaa
gcctggaaaccgtcgcattcagatgctaaaaaagaagctgaagaagatgaagccaagaat
gcggaattgtacaaaaagacaagaagtatattgaacaagttgacgccccagaagtttcaa
actctggttacacagatgcagtcgttaccgatagactctgaaagtaaacttaaaggagtc
attgatttagtctttgaaaaggctatcagtgagccaagcttcagtgttgcctatgccaat
atgtgcagatgtttgtcaatgtccaaagtgcagtcagaatctaaaccaggagagatggta
aactttcgtgctgtgttattgacaagatgtcagagggagtttgagaaggacaaatcctct
gaagcaggttttttggtcaaacgtgaagaaattgaaaaggctgaagatggtgcaaagaaa
gaggagttaaaacaagaattagcttatgaagaatctaaagcaaaacgaagatctttagga
aatataaggtttataggtgaattatttaaattgaaaatgttgacagagaacattatgcat
gactgtgtgttcaaattattacgcaccaaagatccagaaaatctcgagtgcttatgtaga
ctactcacaactataggaaaagaattagacgtagataaggcaaagcctagaatggatcag
tattttcaacaaatgggaaagattgtgaatgagaagaagacttcatcaagagttagattt
atgttacaagatgtcatggatttaagaacaaacaaatgggtgcctcgtagagtagacaac
aatccaaagacaatagaccagattcataaggaagtcgctcaggaagctcaagaaaaagct
ttactctcccaacaaaatcaaatgcaacagaggtctcaaagaggtggcagaagaggtcct
ccagatcagagaggaggtgctgacggttggaacacagttggtgcaaacagaactccgcta
aaatctgtagatagatctatagacccatccaaaatgaaattatctaaacaaaatgtagat
gagagcaatatacagctgggccctgggggtggtgcaagcagattctcagggtggggacgt
ggtagtaccggtggtacaactagcagaccctcacaagagaaggaaaaaccaaacacacca
gctaacagattctctgcccttagtcgaccagatgaggagcagggacgtagatttggtggt
gtaagtcctgccagaagtgacagtagaggtcgcgggttcggcagacccccatcattaggc
gccaggcgctctcaggaaacggaacgggaaagagctgtagcagcagccaaagcaattggt
gccagtcagtctgtagagggcggtcacagagagagaagtcgtgggcgtgccgaaccagag
cctcaacctactccggttcagccagcatctaccgagctcaaggtcctatctgaagacgag
atggacaagaaaaccaaagctatccttgatgaatactttgccattcaagatatgaaggaa
gcactattgtgtgttcaggagctgtctacccagaaccatcatcattttgtatacaatgcc
attaatcatgtgctagagaggtcaccccagtcaaggaaacagactggccatttactgcac
gatctagtcaaaaaatcagttatatctgttgataattatattaaagggttggtagaagtg
ttggagtatgcggaagatttggagattgacattcctaagatctggcagtattacggtgaa
ctgatcagccccatgattcaagataacagtgtaccgttaagcttcctcaaacaggcagcc
gctccactcattgcaaataacaaggctggaattcttctggcagaaatccttcatgatgct
agtcaaagagaggggcataagaaagttgcgggtctgtggaccagttcgggactacaatgg
tctgaatttgtgcctaaaaaccaagtagaacagttcctcaaagataagggactggaatac
actagtggtggtgatagtgccccaaccacccccacaactgggcttccattgagtgagata
gaagtgaatctgcaggaccttatagtcaagaagaaggcggataatgagaccgtatttgat
tggatagaaagtaacgtagatgatccaaccacgaaacgagccaagtttattcgtgcccta
atgactgctgtatgtttaagtgcaatcaaaggtgagaaaggtaaagagagactggaccct
aaggagatcagtgcacggaatgatttattgcagaaatacctcgaccaccaaccagactct
gagctgcaagctctctatgcagtgcaggcattgattgccaagctagaacatcctcaaggc
gtactgagaggaatgttcgacactttatatgatgaagacatcatttcagaagatgcattt
tttcagtgggagaaatctgaagacgagcctgaaggcaagggtgtatgtttaaaacaagcc
atccagttctttacttggttacgcgaggctgatgaagacagctga
DBGET
integrated database retrieval system
