Ruditapes philippinarum (Manila clam): 132740841
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Entry
132740841 CDS
T09557
Name
(RefSeq) LIM/homeobox protein Lhx1-like
KO
K09372
LIM homeobox protein 1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132740841
Transcription factors [BR:
rphi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
132740841
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
132740841
NCBI-ProteinID:
XP_060584846
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MQTCAGCDRPILDRFLLNVLDRAWHVRCVQCSDCNVTLTDKCFSRDGKLYCRNDFFMRFG
TKCAGCLQGISPSDLVRRARNKVFHLKCFTCMMCRKELSTGEELYILDENKFICKEDYLS
SKFSGSDVEDDGDFESVLDQSMQDGEFGTQDEPQSNDQDLFNATSEHGSLNGQISDISQT
LNIQATDQTNHLVGSHLGLNLSISKTSTDSKSDTNSLSDCHLNSDNMGLRDEHRDQLSDS
CLSPAGQDSQIPDHNPGSNCSSQENNDTNNNKDGESNGKSGNKRRGPRTTIKAKQLEVLK
ASFNATPKPTRHIREQLAAETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHFFRNPRR
MRGLRGDLDDGDMMGQGYGYFNENGQDFYPGYPGPGFGDFFPGQGPEMPPGMALLPPQGR
GTPPLVMEHQMHPGGHMGHEGQYLSPQDMMPPSSPEPLMHPDEQYLMTSLPPRSLAPQFQ
PHSSENWG
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcagacctgtgccggctgtgacaggccaatattggatcggttccttctgaatgtattg
gaccgagcctggcacgtgcgttgtgtgcaatgttcggattgcaacgtgacacttactgat
aaatgtttttcacgagacggaaaactttactgtagaaatgattttttcatgagatttggg
acaaaatgcgccggatgtctacaaggaatatcacctagtgatctcgtgcgtcgagcgcgg
aacaaagtattccatcttaaatgtttcacgtgcatgatgtgtcgcaaggaactctcaacc
ggagaagaattgtatatattagacgaaaacaaattcatatgtaaagaggattatttatcg
agcaagttttctggttctgatgtagaggacgatggcgattttgaaagtgttttagaccag
tccatgcaagatggcgaatttggaacgcaagacgaacctcaatcgaacgatcaagactta
tttaacgcaacttctgaacatggttctttaaatggtcaaataagtgacattagtcaaact
cttaacatacaagcaacagaccaaacaaatcatttagtagggtctcatttaggattaaat
ctttcaatttcaaaaacatcaacggattctaagtcagatactaacagcttatcggattgt
catctaaattcggataacatgggtctcagagacgagcatcgggaccagttatcggactcc
tgtttgagccctgctggacaggactcgcaaatacccgaccataatccgggtagtaactgt
tctagtcaagaaaataatgatactaacaacaacaaagatggcgagagtaacggaaagtct
gggaataaacgacgaggccctcgcacaactattaaagccaaacagctggaagtgctgaag
gcctccttcaacgcaactccgaagccaacacgtcatatccgagagcaactggcagcggaa
acgggtctaaacatgcgtgttattcaggtatggttccaaaacagacgatccaaggaacgc
agaatgaagcaacttagcgcgcttggtgccagacgacatttttttagaaatccacggcgc
atgcgcggtcttagaggtgacttagacgacggtgatatgatgggtcaaggatacgggtat
tttaatgaaaatggccaagatttctatccgggttaccccggtccaggctttggcgacttc
ttccccggacaaggaccagaaatgcccccggggatggcgcttctaccaccacagggacgg
ggaacaccacctttagtgatggaacatcaaatgcatcccggaggtcatatgggtcacgaa
ggtcagtacctatcaccacaagacatgatgccaccatcgtctccagagcctcttatgcac
ccggatgaacagtatttaatgacgtcacttccgcccagatcattggcgcctcaatttcag
ccacactcgagtgaaaattggggataa
DBGET
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