Ruditapes philippinarum (Manila clam): 132740852
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Entry
132740852 CDS
T09557
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132740852
Membrane trafficking [BR:
rphi04131
]
Protein recycling
Others
EARP complex
132740852
Endosome - Golgi transport
Tethering complex
GARP complex
132740852
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
Sec8_N
Syndetin_C
COG5_N
COG4_N
Laminin_II
Snf7
COG3_N
Dor1
NBD94
LXG
DUF2009
Med11
Motif
Other DBs
NCBI-GeneID:
132740852
NCBI-ProteinID:
XP_060584875
LinkDB
All DBs
Position
Unknown
AA seq
850 aa
AA seq
DB search
MAALEDDENLDEEIFQDIALLTFPEDVQSVIDDILPSEDPLDRPDFNPVDYINSLFPTEQ
SLSNIDDVVGKIRFKIRRLDDDIRTVVRGQTNVGEDGRQSLEEAQRAIQDLFTKIKDIKD
KAEKSEEMVKEITRDIKQLDHAKRHLTSSITTLNHLHMLVGGVESLTSLTRRRQYGEVAN
LLQGVLNVLEHFQRYMSIPQIKELADRVKQIQADLGSQIISDFEEAFQGSGAKYGPGNQR
QLKEGCFVVNILDPKVKRELLGWFVKLQLTEYLVLFGENQDVAWLDKIDRRYAWIKRTLV
DFEEKFGHLFPVDWEVSERICTEFCDITRKELTKIMGKRRSEIDVKLLLFAIQRTTNFEA
LISKRFTGVTLQTGQSKPVPSKPPPAKNPFEEETTESPNPFAEDLLAENTDSDESKANVK
PLSSPFLGIISKCFEAQLDIYIESQDRNLADLMNRFLDDFKQYGTPRIESEEGSNVLPSS
ADLFVCYKKCMVQCSQLSTGQPMIDLTRTFQKYLKEYSVRILLNNLPKLSNQSSNVSSAS
GLIQSILREGEITKLTEEEQCRTCSILCTAEYCMETAQQLEEKLREKVDKELAAKIDLNS
EQDLFHNVISNCIALLVQDLETACEPALTAMSKMSWSSVEAVGDQSGYVTAITGHLKTAL
PLIRDNLASSRKYFTQFCVKFANAFIPKFIGSLFKCKSVTAVAAEQLLLDTHSLKTLLLD
LPSLGSSVTRKAPASYIKIVQKGMTKAEMILKVMMNHHEPAMGFIDNYIRLLNDSDIGEF
QKILEMKGLKRSEISSLLEMYRARIPVSMAIGRQSSVEMSGQGHTSMMTSTPEPESSRIR
KLEKLIKKRL
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggctgctttggaagatgatgagaatttggacgaagaaatttttcaagatatcgcttta
ttaacgtttccagaagatgttcaatcagttattgatgatatattaccaagtgaagatcct
ctagacagaccagactttaatccagtagattacattaattcattattccctacagaacaa
tccttgtccaatattgatgatgtggttggcaaaataaggttcaaaataaggcgattggat
gatgatataagaacagttgtacgtggtcagacaaatgttggtgaggatggtagacagtca
ctggaagaggcacagagagctatacaagatctatttaccaaaattaaagacatcaaagat
aaagctgaaaaatcagaagaaatggtgaaagagattactcgagacataaagcaacttgat
catgctaaaagacatttaacttcttctatcactacactcaaccatttacatatgttagtt
gggggagtagaatcgctcacgtcattaacacgaagacggcagtatggggaagtagctaat
ctattgcaaggtgtccttaatgtactagaacatttccagagatacatgtctataccacaa
attaaggaattagctgatagggtaaaacagattcaggcagaccttggttcacaaattatt
tcagattttgaggaggcatttcaagggtctggtgccaaatatggtcctggaaatcagaga
cagctaaaggaaggttgttttgttgtgaatattcttgacccgaaagttaaacgtgaatta
cttggatggtttgtaaagttacaactgacagagtacttggtattgtttggagaaaatcag
gatgtagcctggttagacaagatagacaggagatatgcatggattaagcgcacattggtg
gactttgaggaaaaatttggtcatctgttccccgtagactgggaagttagtgagagaata
tgtactgaattctgtgatattacaagaaaagaactaacaaagataatgggaaaaagacgg
tcagaaatagatgtaaaattgttactatttgccattcagagaacaacaaactttgaggct
ttaatttccaagagatttacaggtgtaacattacagactggccagtccaaacctgttcct
tccaagcctcctccagctaaaaacccatttgaagaggagacaacagagagtcctaatccc
tttgccgaggatttacttgctgagaacactgattctgatgagtccaaggcaaatgttaaa
ccactatcatcaccattcctgggaattatatcaaaatgtttcgaggctcaacttgatatt
tacatagagtcacaggacagaaatctagcagatttaatgaacagatttttagatgatttc
aagcagtacggcactccacgtatagaatcagaggaaggcagtaatgttttaccaagcagt
gctgatctctttgtttgctacaagaaatgtatggtgcagtgttcacaacttagtactggt
caacctatgattgaccttacaagaacattccaaaaatatcttaaagaatattctgttaga
atattgcttaataatcttcctaaattgtcaaatcaaagcagtaatgtatcatcagcctca
ggtttgatacaaagtatactgagagaaggggagataacaaagttaacagaggaagaacaa
tgtagaacatgtagcattttgtgtactgcagaatactgtatggaaactgctcagcaactt
gaagaaaaactgagagaaaaagtggacaaagagttagctgctaaaatagatttgaattca
gaacaggatttgtttcataatgtcatatcaaattgtatagcactgttagttcaggatttg
gagacggcatgtgaacctgccctaacagcaatgtccaagatgtcatggtcatctgtcgag
gctgtaggtgaccagagtggatatgttactgcaataacaggacatctaaaaactgcttta
cctctaatcagagacaacctggcttcttcaagaaaatacttcacacaattctgtgttaaa
tttgctaatgcatttatcccgaagtttataggcagtttattcaagtgtaagtcagtgaca
gcagttgctgcagaacagttgttactggacacgcattcactgaagacgttattgttagat
ctaccttcacttggttctagtgtaaccaggaaagcaccggcaagctacataaagattgta
cagaagggaatgacaaaagcagagatgattttgaaggtaatgatgaatcatcatgaacca
gccatgggctttattgacaattacatacgcctgctaaatgattccgatattggagagttc
cagaagatacttgaaatgaagggactaaagaggagtgaaatcagttcactgttggaaatg
tacagagcaagaatccccgtttccatggcaataggccgccaatcttcagtcgaaatgtca
ggtcaaggtcacacaagtatgatgacttccacaccggagccagagtcaagcagaataaga
aaactagaaaaacttatcaagaaaagattgtag
DBGET
integrated database retrieval system
