Ruditapes philippinarum (Manila clam): 132741342
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Entry
132741342 CDS
T09557
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132741342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132741342
03012 Translation factors [BR:
rphi03012
]
132741342
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
132741342
Translation factors [BR:
rphi03012
]
Eukaryotic type
Release factors
132741342
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Motif
Other DBs
NCBI-GeneID:
132741342
NCBI-ProteinID:
XP_060585468
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MASNGVDGETNADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQIPRVSKMLADEF
GTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVIYCGTIVTDEGKEKKVNIDFEP
FRPINTSLYLCDNKFHTEALTALLADDNKFGFIVMDGNGALFGTLSGNTREVLHKFTVDL
PKKHGRGGQSALRFARLRMEKRHNYVRKVAEVAVQMFISNDKVNCSGLVLAGSADFKTEL
SQSDMFDLRLQQKVIKIVDVSYGGENGFNQAIELSADALSNVKFIQEKKLIGRYFDEISQ
DTGRFCFGVDDTLKALEMGAVDILIVWENLDITRYVLKNHQTDVENILFLTPEQEKDKTH
FLDKDTGVELELQDQMPLLEWFANNYKNFGATLEIVTDRSQEGAQFVKGFGGIGGILRYQ
VDFQILDPGLDGFDDFNLDDY
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcctctaacggcgtagatggcgagaccaatgctgatcgtaatgtagaaatatggaaa
ataaagaaacttataaaaagcttggaagctgctcgtggcaatggcaccagcatgatttct
cttatcattccacccaaagatcagattcctcgagtctccaaaatgttagctgatgagttt
ggaacagcatcaaatattaaaagtcgtgtaaacagactatctgtacttggagctattaca
tctgtacagcaaagattaaaattgtacaacaaagtacctccaaatgggttggtgatatat
tgcggaacaattgtgacagatgaagggaaagaaaagaaagtgaacatagactttgaacca
tttagacctatcaatacatccttatatctatgtgataacaaatttcacaccgaggcatta
acagcactgcttgcagatgataataaatttggttttattgtgatggatggtaacggggca
ttgtttggaacattgtcaggaaacacgagggaagttttgcataaattcacagtggattta
ccaaaaaagcatggaagaggaggtcagtcagcgcttcgttttgctcgattaagaatggag
aagcgacacaactatgtacgcaaagtagcagaagtagctgtacagatgtttatctcaaac
gacaaagtgaattgctctggtcttgtattggccgggtcagcagattttaaaactgaactc
agtcagtcagatatgtttgatctgagattacaacaaaaagtgataaaaatagtagatgta
tcatatggtggtgaaaacgggtttaaccaagctattgaacttagtgcagatgcattatca
aatgttaaattcatccaggaaaagaaattaataggccgatattttgatgaaatctcacaa
gacactgggcgattctgttttggtgttgatgacacattgaaagcactagagatgggagct
gtagatattctcattgtatgggagaaccttgatatcaccagatacgtgctcaaaaatcat
caaacagatgttgaaaacatccttttcctcacaccagagcaagaaaaagacaaaactcac
tttttagataaagatactggtgtagaattagagcttcaggaccagatgcctttattagaa
tggtttgcaaacaattacaagaactttggagccaccctggaaatagtgacagatagatca
caagaaggtgcacagtttgtgaaaggatttggtggaattggaggaattttacgataccaa
gtggacttccagatactagatccaggtttagacggctttgacgatttcaaccttgatgat
tattaa
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