Ruditapes philippinarum (Manila clam): 132741551
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Entry
132741551 CDS
T09557
Name
(RefSeq) tuftelin-interacting protein 11-like
KO
K13103
tuftelin-interacting protein 11
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rphi03041
]
132741551
Spliceosome [BR:
rphi03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
132741551
Other components
Complex C specific factors
132741551
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
132741551
NCBI-ProteinID:
XP_060585725
LinkDB
All DBs
Position
Unknown
AA seq
819 aa
AA seq
DB search
MSSPEVEKFEITDDDVYSSFNIRQGRRQTKNQATYGMWADNDSDDERPGFGGGKKKSDFT
APIGFVSGGIKQGDKTFKQGEEEEEDDDTHDADFDIGDIARLSYKGKKKTKDQGGYRRGV
TSTAYNDKDIGNWEKHTKGLGMKLMQKMGFEVGKGLGKNKQGITTPVEAVKRKGQKAGIA
FHGSERSDRSLVDFPVQDQDAQEEKEFKEQLSQWRKEPEGKRKKVKYVYKTAQEAIDTGT
GKKKGLKSEMSNVKVIDMTGKEKKVLTGYHTIANRHDRPDEDDDVVPVVQERSSATVFSM
PELTHNLTLLVDMSEEDIVQNDRKLKHDKDHIVNMKYEKERLDTVLEQEEKQIERLAKVL
EIIGTCNERTNPGCSNPVTLDECLAIFKILQNEFYTEYKMYELETLAIALVFPIMREHFK
NWNPLVDKQYGLSVIKEWQYILGDPNHVYIKDQNNMDVYQRLIWDIWLPNVRTAILKWNC
RQCDGVIELLETWMPVLPTWVMENILDQLVLPRLMQEVENWNPLTDTMPIHAWLHPWLPL
MRDKLEPLYAPIRHKLGNALTNWHPSDSSAKVILKPWHGVFRDGHMEVFLRKNILPKLEM
CLQEFPINPHQQTLEPLHWVLSWTELISLRYMVPMFEKCFFSRWLQVLCTWLGNMPNYDE
VTKWYLGWKSVFTEQYLTHPVIKEMFTKALDMMNRAVSGHFQPGVKENMAYFTHTERRNI
GDPNTSRSNSPSVGGPQEPSLKSTSSTYPGSFRELVERKAEENNLVFLPIPGKTHEAKQI
YRCGKVTMYFDRNVIFMLDDNNMFIPVALPKLLEAAKHK
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaccagaggttgaaaagtttgagattacagatgatgatgtgtacagttcattc
aatatacgccaaggacgcagacagaccaagaatcaagccacttatggaatgtgggcagat
aatgacagtgatgatgagaggccagggtttggtggaggaaagaaaaaatctgattttact
gcccctataggatttgttagtggaggaatcaaacagggagataaaactttcaaacaagga
gaggaggaggaggaagatgatgatacacatgatgctgactttgatattggagatattgcc
agacttagttataaaggaaagaagaagaccaaagaccagggtggttacaggcgtggtgtg
accagcacagcttacaatgacaaagatataggtaactgggagaagcataccaaagggctt
ggaatgaaactcatgcaaaagatgggttttgaggtagggaaaggattgggtaagaacaaa
caaggtataaccacaccagtggaggcagtaaagcgtaaaggtcagaaggcaggtatagca
tttcatggctcagagaggtcagataggtcactggtagattttcctgtacaagaccaggat
gcccaggaggagaaggaatttaaagaacaattatcacagtggagaaaagaacctgagggt
aaaaggaaaaaggtgaagtatgtatacaagacagcccaggaagccattgatactggtact
ggtaaaaagaaaggactcaaaagtgagatgtcaaatgtcaaggtcattgatatgacaggc
aaggagaagaaagttctcacaggataccatacaatagcaaatcgtcatgaccgaccagat
gaggatgatgatgtggtaccagtggtacaggagagatcatcagctactgtattcagcatg
ccagaacttacacataatcttaccttacttgttgatatgtcagaggaagatattgtacaa
aatgatagaaagttaaaacatgataaagatcacattgtaaacatgaagtatgagaaggag
agactggatactgtattagaacaggaagagaaacagatagagagacttgccaaagttctc
gagatcattggaacgtgtaatgagaggacaaatcctggttgttcaaaccctgtcaccctg
gatgaatgtttggctatatttaagatactacagaatgagttttacacagaatataagatg
tatgagttggagacactggctatagctctagtgttccctattatgagggaacactttaag
aattggaacccgttggttgacaagcagtatggactatcagtgattaaagaatggcagtat
atattgggagatcctaatcatgtatatatcaaggaccagaataatatggatgtttatcag
aggttgatctgggatatttggctacctaatgtcagaactgctattctgaagtggaattgt
cgacagtgtgatggtgtaatagagttgctagaaacatggatgcctgtgttacctacgtgg
gtgatggagaatatactagaccagctggtgttaccacgattaatgcaggaagtagagaac
tggaatcccctcactgacaccatgccaatacatgcctggttacatccatggttacctctc
atgagagataagttagagcccctgtatgcacctatcagacacaagcttggtaatgcttta
actaactggcatccttcagacagttcagcgaaggttatattgaagccctggcatggtgtg
ttcagagatggtcatatggaagtatttctaaggaaaaacatcttacctaaactagagatg
tgtctacaggaattcccaataaaccctcatcaacaaactctagaaccattacactgggtg
ttatcgtggacagagttgatatcactacgctacatggttcccatgtttgagaaatgtttc
ttctctcgctggttacaagttctctgtacgtggcttggcaatatgccaaattatgatgag
gtaaccaagtggtatctaggctggaaatctgtgttcacagagcaatatcttacgcatcca
gttataaaagagatgtttacaaaggcactggatatgatgaatcgtgcagtgtctggtcat
ttccagccaggtgtaaaggagaatatggcgtacttcacccacactgaacgtaggaatata
ggagatcctaatacatcaagatctaattcaccgtctgttggtggaccacaagagccaagt
ctaaaaagtacatcatcaacttatcctggcagtttcagagagcttgtggagagaaaggct
gaagaaaacaatctggtgtttttacctataccaggaaagactcatgaagccaaacagatt
taccgttgtgggaaagtcaccatgtattttgataggaacgttatttttatgcttgatgac
aacaatatgtttataccagttgctttacctaagttgttagaagctgcaaaacataaataa
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