Ruditapes philippinarum (Manila clam): 132741661
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Entry
132741661 CDS
T09557
Name
(RefSeq) patched domain-containing protein 3-like
KO
K24682
patched domain-containing protein
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rphi04990
]
132741661
Domain-containing proteins not elsewhere classified [BR:
rphi04990
]
Other domain-containing proteins
Patched domain-containing proteins
132741661
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
Patched
NPC1_MLD
VP4_helical
Motif
Other DBs
NCBI-GeneID:
132741661
NCBI-ProteinID:
XP_060585862
LinkDB
All DBs
Position
Unknown
AA seq
907 aa
AA seq
DB search
MADCLNKCYDAVEKRIGAVFSRYGRFVARNPWKIIIIGILINGLLSIGMLRLNVVIDVQR
VYTPIGSQASKDSDKLSDIFPDMSGSNFIGYQMPNFGRYGEVIVIPKSGNILDGVFLTQL
IELYNLLLSIETSDDNGRTVTLNEICARFHGTCSIDGDIFVDTQFISDINSSNPIPFPYY
NHASRGQIYYEQLIGGVNISLNNLVSAKMLIMRVNLRTDTEYFSETAKNWQNSFLSQIKE
YSSNHFDIAFSHSDSLSEELNENVSGDILIFSITFTIMITYACVATMTARCDVVGQRSNL
GFAGVIAAGLAIVSAFGLGSACGVEFVSIVGVVPFLIIGIGVDDMFMLMSGITSTNYADD
VETRVGETMRTSGVSITITSLTDLLAFAAGASSIFLSVRNFCIYCGIAVVFCYINQATIF
IACIAVNEKRTAENRHYASCFKVKTPSEEGTKNCYMLCCTGRKPKNQSESESYLDKLPKL
LLPKIILPSPAKIIILVLFAGYLGVSIFGVTQMEQGIELKNLVAKTSYYYEYRDHLDNNF
PLGTPLSIVFDRPLAYSDATVQANIDTLLSNLKSENTVQDNLEINWLSEYKKDTTNYNDA
TEQNFISGLQKFLIIPSNTRFRNDVVINYSNTSITASRVHLISESIKQSQEQGKFMLRMR
EVVSHSPLSVFAFSPAFLFYEQYVAILSQTLQTVGIAVAMVFFVTCIFMPHPLLLLYITT
TVAMITLGIFGFLSFLDLTLSAITMIHIIMSIGFSVDFAAHICHGYMISSGANRNEKMKS
GIERSGAPIFHGAISSLLGVVMLAAAKSYIFYSFFQVMSLVITFGILHALFLLPVILSLI
GPSAQGMGSKVDIKLEDEKDRPNTKQNETGAHVPLSDLGREESSVSPATHIWTVVKSDDS
FDRKGLT
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggctgattgtttaaataaatgctacgatgcagtcgaaaagaggattggtgctgtattt
tcaagatatggccgcttcgtagctagaaatccatggaagataatcatcatcggaattctg
ataaatggacttctaagtattggtatgctaaggctaaatgttgttatagatgtacaacgt
gtctacactccaataggaagccaggcaagcaaggatagtgacaaattaagtgacatcttt
cctgacatgagtggttctaacttcattggataccaaatgcctaattttggtcgatacgga
gaggtaatagttatcccaaagagcggtaacattttagatggagtattcctcactcaacta
atagaactgtacaatcttttgctatcaattgagacttctgatgataatggaagaacagtt
acattgaatgaaatttgcgctagatttcacggaacttgtagtatagacggagacatattt
gtggacacgcaatttataagtgatatcaattcaagcaatccaattccctttccttattac
aatcacgcatctcgtggtcaaatctattatgaacaacttataggtggcgttaatatttcc
ctaaataatttagtttctgctaaaatgttaatcatgcgtgtgaatttacgcactgatacc
gaatatttttcagaaacggcaaaaaattggcaaaattcttttttatcgcagataaaagag
tattcatcaaaccatttcgatattgcattttctcactctgattctcttagtgaagaattg
aatgaaaacgtgtcaggtgacattttgatattttcaataacattcacaataatgattaca
tacgcatgcgtagcgacaatgacagctcgatgtgacgtagttggtcaaaggtcaaatttg
ggatttgctggcgttattgcggctggtcttgcaatagtttcagcatttggtcttggaagc
gcctgcggggtggaatttgtcagtattgttggagttgtcccttttcttataattggaatt
ggagttgatgacatgtttatgcttatgtctggtataacaagcaccaactacgcagacgat
gttgaaacaagagttggggaaacaatgaggaccagtggtgtatcaatcacaatcacttct
ctcaccgatttattagcctttgccgctggagcttcttctatatttttaagtgtccgaaac
ttctgcatttattgtggtatagctgtagtgttttgctacatcaaccaagccacgattttc
atcgcatgcatagccgtaaacgaaaaaaggacagccgaaaacagacattatgcttcatgt
tttaaagtaaagacaccaagtgaagaaggcacaaaaaattgctacatgctttgctgtaca
ggcaggaaacctaaaaatcagtctgaatctgaaagttatttagataaactgcctaagtta
ttgttacctaaaattatattgccgtcacctgcaaaaatcatcattctcgttctttttgca
gggtatttaggtgtttccatttttggtgtcactcaaatggaacaaggcatagagctgaaa
aatcttgtcgccaaaacatcatactactatgaatacagggatcatttagataataatttt
cctttaggaaccccattgtctattgtatttgatagaccacttgcctattcggatgcaaca
gttcaagcgaatattgatactcttttatcaaatcttaagagcgaaaatacagtacaggat
aatctggaaataaactggctgtctgaatataaaaaagacactacaaattacaatgatgca
acagagcaaaatttcatctcaggccttcaaaaatttttgattatccctagcaacacacga
tttcgaaacgatgttgttatcaattacagcaacactagtataacggcctctagggttcat
ttaatatctgaaagtatcaaacaatcacaggaacaaggaaagtttatgttgcgcatgcgt
gaagtggtgtcacacagccctctttcagtatttgccttttctcctgcttttcttttttac
gagcaatatgtagccatcttgtctcagacactacaaacagttggaatagctgtcgctatg
gtattttttgtaacgtgtatattcatgcctcatccgctgttgctcctatatataacaaca
actgttgcaatgattactctcgggatattcggatttctttcatttttagaccttacttta
agtgctattacaatgattcacattattatgagcattggtttctctgtagactttgcagca
catatctgtcacggttatatgatttcgagtggtgctaaccgaaacgaaaaaatgaaatcc
ggtattgaaagatccggagctccaatttttcatggagcaatttcatcgttgttgggtgta
gttatgttggcagcagccaaatcatatatattctattcattttttcaagtcatgagcctt
gtaatcacattcgggatccttcatgctcttttcttacttcctgttatcctgtcgttgatt
ggtccatctgctcaaggaatggggtcaaaggttgatattaaactggaagacgagaaagac
agacctaatacgaaacaaaatgaaacaggtgcccatgtccccttatctgacttagggcgt
gaagaatcttcggtttcaccggcaacccatatttggacagttgttaaaagtgacgattcc
tttgatcgtaaaggtttaacttag
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