KEGG   Ruditapes philippinarum (Manila clam): 132741746
Entry
132741746         CDS       T09557                                 
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP-like
  KO
K16061  baculoviral IAP repeat-containing protein 7/8
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    132741746
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rphi01002]
    132741746
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rphi04121]
    132741746
Peptidases and inhibitors [BR:rphi01002]
 Peptidase inhibitors
  Family I32: IAP family
   132741746
Ubiquitin system [BR:rphi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    132741746
SSDB
Motif
Pfam: BIR zf-C3HC4_3 zf-RING_2 Prok-RING_4 zf-C3HC4
Other DBs
NCBI-GeneID: 132741746
NCBI-ProteinID: XP_060585987
LinkDB
Position
Unknown
AA seq 673 aa
MESRTTRTRVYCVKMVLLLTVMVALHYVTMETNLTTGHHKQYTENKTHALRTESLAKDIS
NTSKILPCVPDFNSTIESKFGKHGNISLVTEMVTETGNDVLKNRTGKLLSRRQIVLKHLE
YTFVWVSSCKDSIVSHSLTIIDSETLIKIAVLLKCVHFLLNKRRQNSAKSNHEKKMCSYD
FLFQLTNGYQCSVNVYPFSLKVYINGLEKNSDKSVKCMNNEWARFESFKTFPEECPASAL
RLAKAGFYSTNNGQEAVCFSCGLNNEVWSDSEAVVDVHKRLSPDCKFINGETTENVSIHE
DHKETQSGACGGPEDRHSNRVETEQSQEQRNRQELSFDAVQSTTEHLSSSSINSQESGQQ
LVIGNGYRAQHSENIPTDDIQHFPGIINERPKHPDYAIKSVRLSSFAFWPSTNVMKPEDL
TEAGFFFCGTQDLVRCFFCGGGMKNWEYGDSPWIEHARWFSTCAYLKQCKGEDFVNLCQM
SNMTFPTQNNFQVRDLDSQQTNLVADQHIKDVNSIAAKRVLDMGYTQPQVEVAIKQTRQR
IGPSEELKAQNLVEYLLDDSNTPASVPTLTSSTSQQQQQSNTSAATNGSNSPRSNSPVAS
GRQLSPKEERKVLKEENRVLKEQMMCKVCMDKDANTVFLPCGHLVSCVDCANALRKCAVC
RTIIQGTVRAYPA
NT seq 2022 nt   +upstreamnt  +downstreamnt
atggaaagcagaacaacaagaacacgtgtttattgtgttaaaatggtattgttattaaca
gtcatggtagctttacactatgtgacgatggagactaatttaactactgggcatcataaa
caatacacggaaaataaaacacatgccttaaggacggaatctctagctaaggatatttca
aacaccagtaaaatattaccatgtgttcccgactttaattcgacaattgaatcaaagttt
ggaaaacatggtaatatctcactagtgactgaaatggtaaccgaaacgggaaacgacgtg
cttaaaaatagaacggggaaattactgtcaagaagacaaattgttttaaaacatttggaa
tatactttcgtgtgggtttcatcatgtaaagatagcatcgttagtcattcattaacaata
atagattccgaaactttgattaaaattgccgttttactaaaatgtgttcatttcttgctg
aataaaaggcgtcagaattctgcaaaatcaaaccatgaaaagaaaatgtgttcgtatgac
tttttatttcaattgacgaatggatatcagtgtagtgttaatgtgtatccattttcttta
aaagtgtatataaatgggctagagaagaatagcgataaaagcgttaaatgcatgaacaat
gaatgggcaaggttcgaatcgtttaaaacatttccagaagagtgcccagcatcagcgtta
cgactggcaaaagctgggttttattcaacgaataatggacaagaggccgtttgcttttcc
tgtggactaaataatgaagtctggtcagactctgaagctgtagttgacgttcataaacgg
ctgtcaccggattgtaagtttattaacggggagacaactgaaaatgtctccatacatgag
gatcataaagaaacacagagtggtgcgtgtggaggaccagaagatagacattcaaacaga
gtagaaacagaacaatctcaagaacaaagaaatcgtcaagaactgtcttttgatgcagta
caaagtactacagaacatttaagctcgtcgagtattaattctcaagaaagtgggcaacaa
ttagtaattggcaatggttatcgggctcagcattctgagaacattccaacagacgacatc
caacatttcccgggaataataaacgaacgaccaaaacacccagactacgcgatcaaaagt
gtaagattatcatcatttgcgttttggccgagtacaaacgtaatgaaacccgaggattta
acagaggccggctttttcttttgtggaacacaagacttagtccgatgctttttttgcggg
ggtggaatgaaaaattgggagtacggggacagtccctggatcgagcatgcgaggtggttc
tctacatgcgcatatctaaaacaatgcaagggagaagacttcgttaatttatgtcagatg
tcgaatatgaccttcccaacacagaataactttcaagtgagagatcttgactcccagcaa
acaaatctagttgctgatcaacatattaaagatgtaaacagtattgcagccaaacgtgtt
ctagacatgggatacacccaaccacaggttgaagtcgctattaaacaaacacggcaaaga
ataggtccatcagaagaacttaaagcccagaatttagtagaatatctacttgacgatagt
aacacacctgctagtgttccaacattgacctcatcaacatcacaacagcagcagcagagt
aatacatctgctgctacaaatggtagtaattcaccaagatctaatagtcctgttgcaagc
gggagacaattatctcctaaagaagaaagaaaagttttgaaggaagaaaatcgtgtttta
aaggaacagatgatgtgtaaagtatgtatggataaagatgccaacactgtttttcttcca
tgtggacatttagtatcatgtgttgattgtgcaaatgccttaaggaaatgtgctgtttgt
cggacgattattcaaggaactgtgcgtgcatacccggcataa

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