KEGG   Ruditapes philippinarum (Manila clam): 132741848
Entry
132741848         CDS       T09557                                 
Name
(RefSeq) splicing factor U2AF 50 kDa subunit-like
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132741848
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rphi03041]
    132741848
Spliceosome [BR:rphi03041]
 Complex A
  U2 snRNP components
   U2 related factors
    132741848
 Complex B
    132741848
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 Transformer RRM_9 LAM_C Dsh_C
Other DBs
NCBI-GeneID: 132741848
NCBI-ProteinID: XP_060586088
LinkDB
Position
Unknown
AA seq 451 aa
MADFEEFDREMAQVKEERDKDRPRRSRSGSASRSRTKRSRSRDRKRRSRSRERGERANRK
HRSRSRSRERTTRKKKPYKYWDVPPPGFEHMTPMQYKALQAAGQVPQAAPVPTTQITNTT
VPFAGSAVSRQARRLYVGNIPFGVTESAMMDFFNDQMKMSGLAQAEGNPVIAVQINLDKN
FAFVEFRSVDETTQAMAFDGINFQGQSLKIRRPRDYQVLPGMSENPSVNVPGVVSTVVQD
SPNKIFIGGLPNYLNEDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVEMMGGPSV
TDQACAGLNGMQLGDKKLIVQRASVGAKNAQAAPVQVQVPGLNLQQGSGPPTEVLCLMNM
VTPEDLEDEDEYEDILEDVREECGKYGMVKSLEIPRPIKGIDVPGCGKIFVEFNSLIDCQ
KAQQALTGRKFSNRVVVTSYYEPDKYHRREF
NT seq 1356 nt   +upstreamnt  +downstreamnt
atggctgatttcgaggaatttgacagagaaatggctcaagtgaaagaggagagagataaa
gatagacctagaaggtcaaggtcagggtctgcttcaaggtcaaggactaaaaggtcaaga
agtagggacagaaagaggaggtcaaggtcacgtgagaggggagaaagagcaaacagaaaa
cataggtctagaagtcgctcaagggaaagaactacaagaaaaaagaaaccctacaaatat
tgggatgtccctccaccgggatttgagcacatgaccccaatgcagtacaaagcattacaa
gctgctggccaagttccccaagctgctccagttcccaccacacaaattacaaatacaaca
gtgccatttgctggcagtgcagtcagtcggcaagctcggcgattatatgtgggaaatata
ccttttggtgtaactgagtctgccatgatggactttttcaatgaccagatgaaaatgagt
ggtttagcacaggcggagggtaacccagtgattgctgtacaaatcaacttggataaaaac
tttgcttttgttgagttccgttcagtagacgaaacaacacaggcaatggcgtttgatgga
atcaattttcaaggacagtcgctgaaaattagaagacccagagattatcaggtgttgcct
ggaatgtcagaaaatccctctgtgaatgtaccaggtgtggtgtctacagtagtgcaagat
tctccaaacaagattttcattggtggattaccgaactatctaaatgaagatcaggtaaaa
gaactactgacatcatttggaccactaaaggcttttaacttggtgaaggacagtgctaca
ggattgtcaaagggttacgccttctgtgagtatgttgaaatgatgggaggaccctcggtt
actgaccaggcgtgtgcgggtttaaatggaatgcagttaggggacaagaagcttattgtt
cagcgagcgagtgtaggagcaaagaatgcccaggccgcaccagtacaagtacaggtacca
ggtttgaacctgcaacagggttcaggaccacctacagaggtgctgtgcctgatgaacatg
gtcaccccagaagacctggaagatgaagatgagtatgaagatattttggaggatgtacga
gaagaatgtggtaaatatggtatggtgaagagtttagaaataccgcgaccaatcaagggt
atagatgtacctggatgtggcaagatatttgtggagtttaactccctgatagactgtcag
aaggcccagcaagctctaacaggccgcaagttctctaacagagttgttgtcacatcatac
tacgagccggacaaatatcatcgtcgtgaattctaa

DBGET integrated database retrieval system