Ruditapes philippinarum (Manila clam): 132742091
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Entry
132742091 CDS
T09557
Name
(RefSeq) ATPase family gene 2 protein homolog A-like
KO
K14575
AAA family ATPase
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
132742091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rphi03009
]
132742091
Ribosome biogenesis [BR:
rphi03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
132742091
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_5
RuvB_N
Rad17
RNA_helicase
AAA_16
TIP49
AAA_22
AAA_33
Mg_chelatase
AAA_14
AAA_2
NPHP3_N
AAA_28
ABC_tran
AAA_7
DUF815
ATPase_2
NACHT
RsgA_GTPase
DCAF15_WD40
Adeno_IVa2
AAA_29
nSTAND1
DUF6497
Motif
Other DBs
NCBI-GeneID:
132742091
NCBI-ProteinID:
XP_060586370
LinkDB
All DBs
Position
Unknown
AA seq
906 aa
AA seq
DB search
MPPKNKQIIPEWNQCIHCSRILGYRDLSKHKDECLSNKSFSHGYVLHNIFNAVVCPLPEG
KGGNIDLPVQMKKDLILMNPSVMQLCGFYIGGLCVLNKTHIRTCWPCSSVGLSSVAISDS
TEGVRQGELVSLELFIDPLQQALEVMLMSSECSPVFKDEMFLQFLSRCKESKYVCKGCKM
VIQYYGQKFNFEVTNIIGQTLPSETFELHGTRDDIDGGSLSESIANLSITNNDSFVSGSD
GTSMESSFGKSDYHSGVDITSTPSSNRKTSDKSKGSEGSSIIDSGLNTSIEKLTTPVKET
DRSTDNLFSPRTPVSERSFSAHENFCTPKVEKFIEKNISQNFYKVTSKTKFIIYSVDSNV
EDRDTSEGKDAVRYADIGGMKKQIDMLKEMVHTPVEQPELFRSFGLPPPSGVLLFGPSGC
GKSMLVKAVISEININIQTVSAPEIWSKFYGETETKLRKIFEDARRLAPSIIVIDDIETL
CPRRDGSHSEVEKRVVTSLLTLMDGINNVESGKFVMVLGTTSKPDVIDPALRRPGRFDRE
IEIGVPSVFDRREILDCMLRRLNHDLTVQEIQEVADAAHGYVGADLAALCKEASLHCMKR
VGHHSDTVCLTLADFNYAMTMVQPSAMREVQLEVPKVLWSDIGGQDHIKLKLKQAVEWPL
KHPEAFTRMGISPPRGILMYGPPGCSKTMIAKALATESGLNFLAVKGPELFSKWVGESER
AVREVFRKARVASPAIIFFDEIDALAIERGSSSGSSNVADRVLAQLLTEIDGVEALKNVT
IVAATNRPDMIDKALLRPGRFDRVLYVPLPDLSTRAEIFNINLRKMPVDSDCTPTWLADC
TAGYSGAEISSVCHEAALFALQEDITCQLVKKSHFQLALNTVTPRINDSLIKFYDEYQQK
SGLHTV
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgcctccaaagaataaacagatcattcctgaatggaaccaatgtatacactgcagtaga
atattgggttatagagacctgtcaaagcacaaagatgaatgtttgagcaacaaatcattt
tcacatggttatgttttacacaatattttcaacgcagttgtctgccctttacctgaaggc
aaaggaggaaatattgacttgcccgttcagatgaaaaaagatctaattctgatgaatccc
tctgtcatgcagctgtgtggattttacattggaggcttatgtgtgctgaacaagactcac
atcagaacatgttggccatgtagcagtgttggtctgtcatctgtggccatttcagacagc
acagagggtgtaagacaaggggagcttgtctctttagagctgtttatagacccactacag
caggctttagaggttatgctgatgtcaagtgaatgtagccctgtgttcaaagacgaaatg
tttttacagtttttatcaagatgtaaagaaagcaaatatgtttgcaagggttgcaaaatg
gtgattcagtactatggacaaaagtttaattttgaagtgacaaacattattggtcagaca
ttgccatcagaaacatttgaacttcacggaactagagacgatattgatggtggaagcttg
tcagaaagtatagccaatcttagtataactaataatgattcatttgtttctgggtcagac
ggaacttcaatggaatctagttttggaaaaagtgattatcacagtggcgtagatattaca
tcgacaccttcttctaacagaaaaacttcagataagtcgaaaggcagtgaaggcagttcg
attatagattctggtctcaacacatcaatagaaaaattgacaactcctgtaaaagaaaca
gatagatcaactgacaatttattttcaccccgaacacccgtcagtgaaaggtcatttagt
gcacatgaaaatttttgtacgcctaaggttgaaaaatttatagagaaaaatatttcacag
aatttttataaagtaacatcaaagactaagtttattatatatagtgttgatagtaatgta
gaggatagggatacaagtgagggaaaagatgctgtcaggtatgctgatattggtggtatg
aaaaaacagattgatatgttgaaagaaatggtccatacgcctgtagagcagcctgaactt
ttcagatcttttggtcttccacctccaagcggtgtgctgttgtttggaccaagtggctgt
ggtaagtcaatgttggtgaaagcagtcatctcagaaatcaacatcaatatacaaacagtg
tcagccccagagatatggagcaaattttatggcgagacagaaaccaaattaagaaaaatc
tttgaagatgccagacgactagctcccagtattattgttatagacgatatagagacttta
tgtccacgtagagatggcagtcacagcgaggttgagaaaagagtggttacctcccttctt
acactgatggacggtataaataatgttgagagtgggaagtttgtgatggttctgggaact
acaagcaaaccagatgttattgacccagctttgagacgacctggacgatttgacagagag
atagagattggggtaccctctgtgtttgacagaagagagattttagactgtatgttgagg
aggttgaatcatgacctgacagtacaagagatacaggaagttgctgatgcagctcacggc
tatgttggtgctgatttagccgccctttgcaaagaagctagtctacattgtatgaagcga
gttggacatcacagtgacacggtctgtttaacattggctgattttaactatgcaatgact
atggtacaacccagtgcaatgagagaagtccagttggaggtccctaaggttttatggagt
gatattgggggacaggatcatattaagctgaagttgaaacaagctgtagagtggccatta
aaacaccccgaggcctttacacgaatgggtatatccccaccaagagggatcctaatgtat
ggacctcctggatgttctaaaacgatgatagccaaggcgttggcaacagaaagtgggctc
aattttctagctgtaaagggtcctgaattgtttagtaaatgggtgggagagtctgagagg
gccgtgagagaagtattcagaaaggctcgagtagcgtctccggccattatattcttcgat
gagatagatgctctagctatagaaagagggagttcatcagggagcagtaatgtagctgat
cgagtattggcacagttattgacagagatagatggtgtggaagctttgaagaatgtcacg
attgtagctgctacaaacagaccagatatgattgataaggctttgttgaggccaggacgt
tttgaccgggtgttgtatgttccactgccagatctgtccacgagggcagagattttcaac
atcaacctacgtaaaatgcctgttgattcagactgcacaccaacctggcttgctgactgt
accgctgggtattctggagccgagatttcctcagtgtgccatgaggcagcattgtttgct
ctacaagaggatatcacctgtcagttagtgaagaaatcacatttccagctagcactgaat
acagttacacctcgtataaatgactctctcattaaattctatgatgaatatcagcaaaaa
agtggtcttcatactgtatga
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