KEGG   Ruditapes philippinarum (Manila clam): 132742142
Entry
132742142         CDS       T09557                                 
Name
(RefSeq) splicing factor 3A subunit 1-like
  KO
K12825  splicing factor 3A subunit 1
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132742142
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rphi03041]
    132742142
Spliceosome [BR:rphi03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    132742142
 Complex B
    132742142
 Complex C
   U2 SnRNP specific factors
    132742142
SSDB
Motif
Pfam: Surp PRP21_like_P ubiquitin Rad60-SLD Tn7_TnsA-like_N CDC45
Other DBs
NCBI-GeneID: 132742142
NCBI-ProteinID: XP_060586452
LinkDB
Position
Unknown
AA seq 789 aa
MPAIEVTTPMQVEEPKNEEENYKTPVIGIIYPPPEVRNIVDKTASFVARNGPEFESRIRQ
NEQNNSKFNFLNPADPYHAYYQHKVKEFREGKGQEPQVPKGQGLGLSKPLEVAKIIQEPV
IPTEPPPEFEFIADPPSISAFDLDVVRLTAQFVARNGRQFLTNLMNREQRNYQFDFLRPQ
HSLFNYFTKLVEQYTKVLIPPKDLLVKLNKESEVYQNVLDQVKYRVDWARYQEMQRRKEE
EAAERERVAYTQIDWHDFVVVETVDFQPNEQGNLPPPTTPDEVGARVLAQERHGKRGTED
EMDVESGESESEDEDSDEEDEEEEVQRMTNRPPMPTQMMEDSDESSDEDEEDQDKDRQEI
RPQQRMPQRPPPVPAMPPPPPPSEIPQPPLPPTPDQVVIKKGYDPKARTIQPEAPSEQFL
VSPITGEKIPVDKVQQHMKIGLLDPKWIEERNRQIQERTDQEEVFAAGSSIESSLKHLAE
RRTDIFGAGTEEAGIGKKLGEEEDEGKKDKKVVWDGHTASMEKVAQKARENFSIDEQIAN
IHKVKGLVPDAEKEKIGPSRTMGMAIPPPPPPSKPAPPKPAPPKQPPPPAVSMPGPPVST
QPQALKRPVVAIQQPPPPQVMMMPPRPPPMQVIGMPPGPPSMMVAQPMRPPGFPAPPPMV
RPPAPVPQAAPPEDEPPSKKQKTEEQLVPEEEWLKLHKGSVKFRVTVPSMPDKPEFNLKG
QTLQFTLPYTDNVSVLKAKINESVGLPGGKQKLQYDGLFIKDSNTLAFYNFVNGGTVQLQ
LKERGGRKK
NT seq 2370 nt   +upstreamnt  +downstreamnt
atgcctgcaatagaagtgacaacgcctatgcaggttgaagaaccgaaaaatgaagaagaa
aactacaaaacaccagtaatcggtattatctatccgcctccagaagtaaggaatattgtt
gacaaaactgctagtttcgttgctagaaatggacccgagtttgagtctcgtattagacag
aatgagcagaacaattcaaaattcaacttcctgaatccagctgatccttaccatgcctat
taccagcacaaggtcaaggagtttagggaggggaaaggtcaagaaccccaggttcctaaa
ggtcaaggtttaggcttgagtaagccattggaggttgctaagattatacaagagccagtt
atacccacagagccacctcctgagtttgagtttattgcagaccctcctagcatctcagct
tttgatttagatgtggtgcgtttgactgcccagtttgtagcaagaaatggtcgacaattc
ctgaccaatctgatgaatagggaacagcgtaactaccagtttgatttcctgagaccgcag
cacagtctgtttaactacttcaccaaacttgtggaacaatatacaaaggtgttaattcca
cccaaagatttactggtcaagttaaacaaggagtcggaggtatatcagaatgttttagat
caagtaaagtatcgtgtagactgggccaggtaccaggaaatgcagcgacggaaagaagag
gaggctgctgaaagggaacgagttgcctatacacagatagattggcatgattttgttgtg
gtggagactgtagattttcagcccaatgaacaaggaaacttgcccccacctaccactcca
gatgaagttggtgcacgtgtgctggctcaagaacgacatggaaagagagggacggaggat
gagatggatgtggagtccggcgagtcggagtcggaggacgaggattctgacgaggaagat
gaggaggaagaggtacagaggatgacaaatagaccgccaatgccgacacagatgatggag
gattctgatgagtcatcagacgaggacgaagaagatcaggacaaagatcgtcaggagatt
cgacctcaacaaagaatgccgcagaggccaccaccagtgcctgccatgcctccaccgcca
ccacccagtgagataccacagcctccattaccaccaacaccagatcaggtggtcatcaag
aaaggatatgatccaaaagcaagaactatccagccagaggcacctagtgagcagttcctg
gtatctcctatcactggtgagaagatcccagtagacaaagtacagcagcacatgaagatt
ggattgttggacccaaaatggatcgaggagcgtaaccggcaaattcaagagcgtacggat
caagaggaagtgtttgctgctggttcctctatcgagagcagcttgaaacatctggctgaa
agacgtactgatatcttcggtgcgggaaccgaagaagctggtatcggtaaaaagcttggt
gaagaagaggatgaaggcaagaaggacaagaaagtggtttgggacggacacacggcctcc
atggagaaagtggcacagaaagccagagaaaatttctccattgatgaacagattgcaaac
atccacaaggttaaaggacttgtacctgatgctgagaaagagaagattggaccttctagg
acaatggggatggctataccaccacccccaccacctagcaagccggcaccacccaaacca
gctcctccaaaacagccaccacctccagcagtatcaatgccaggtccaccagtgagcacc
cagccacaggcgttaaagagaccagtggtcgctatacaacaaccaccaccaccccaggtg
atgatgatgccaccaaggccaccacccatgcaggtcataggaatgccaccaggcccacct
agtatgatggttgcccagccaatgaggcctcctggtttcccagcaccgccacccatggtt
cgacccccggcacctgtaccacaagcggcaccacctgaggacgaaccgccaagcaagaaa
cagaaaacagaagaacagcttgtacctgaggaggaatggctgaaacttcacaagggaagt
gtcaagttccgtgtaactgtacctagtatgccggacaaaccagagttcaacctgaaggga
caaactctccaattcacactgccttacactgataatgtgtcggtattgaaggctaagatt
aacgagtcggttggtttaccgggcggcaaacagaagctccagtatgatgggctatttatc
aaggactctaacacactggcgttctacaattttgtcaacggaggaacagtgcagttacaa
ctgaaggaaagaggaggaagaaagaagtaa

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