| Entry |
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| Name |
(RefSeq) general transcription factor IIH subunit 2-like
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| KO |
| K03142 | transcription initiation factor TFIIH subunit 2 |
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| Organism |
rphi Ruditapes philippinarum (Manila clam)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:rphi00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132742151
09124 Replication and repair
03420 Nucleotide excision repair
132742151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:rphi03021]
132742151
03400 DNA repair and recombination proteins [BR:rphi03400]
132742151
Transcription machinery [BR:rphi03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
132742151
DNA repair and recombination proteins [BR:rphi03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
132742151
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
400 aa
MTEDDDKGYRWETEYEKTWEALQEDAEGSLQPSIDSMLHKAKRRKLLEKISNVRLGMMRH
MFIIIDMSVSMDDQDLKPTRLIASLKLLERFIEEYFDQNPISQLGIIVTKNKRAEKVTEL
GGNPRRHIAAIQKLKERVCQGEPSLQNSLELAIQTLRHMPSHASREVLVLFASLTTCDPG
DILETLRLLKETNVRCSMIGLAAEVRICKKLCTDTNGKYTVILDESHFKDLLNQHTSPPP
AMMNTESSLIRMGFPHHHLGGERSGDKPSMCMCHLDSKSVEGFSTTGYFCPQCKSKYCEL
PVECKACGLTLVSAPHLARSYHHLFPLDQSLEIPVTDFDPGQNIYCYACQIQIQDQTVYQ
CRKCKRIFCIDCDIFVHETLHSCPGCASSRKTQTAEAVFV |
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| NT seq |
1203 nt +upstreamnt +downstreamnt
atgacagaagatgatgacaagggctatcgttgggaaacagaatatgaaaaaacatgggaa
gcgttgcaggaggatgcagaaggttcgttacaacctagcattgacagcatgctgcataaa
gctaagagaagaaaattactggaaaaaatctcaaatgttaggcttggcatgatgagacat
atgtttatcattattgatatgtctgtttctatggatgaccaggaccttaaacctacaaga
cttatagcttctttaaagttactagaacgttttatagaagaatattttgatcagaatcca
atcagtcaactgggtattatagttacaaagaataaaagagctgaaaaggtgacagaactt
ggaggtaatcccagacgacatatagcagctatacagaaattgaaagagagggtgtgtcag
ggtgaaccttcgctacagaattccctagagttggccatacagactctcagacatatgccg
agccatgccagtagagaagttttggtactatttgctagtttaacaacatgtgatcctgga
gatatcctagaaacattacggttgttaaaggagacaaatgtgagatgttccatgataggt
ctggcagcagaggttagaatctgtaaaaagctttgtacagacacaaatggtaaatacact
gttattctagatgaaagtcatttcaaagatttacttaaccagcataccagtccaccacct
gcaatgatgaacacggagtcatcactaatcaggatggggtttccacatcatcacctcggt
ggagagaggtctggcgataaaccctccatgtgcatgtgtcatttagacagtaaatctgtt
gaggggttcagtaccactggatatttctgccctcagtgtaagagtaaatattgtgaacta
ccagtagaatgtaaggcgtgtggtcttacacttgtgtcagcacctcatctagcaagatcc
taccatcatctctttccacttgaccagtcattagaaattccagtcacagattttgatcct
gggcaaaacatatactgctatgcatgtcagattcagatacaggaccaaactgtgtaccag
tgtagaaagtgcaagcgtatattctgtattgactgtgatatatttgtgcacgagactctt
cactcctgcccgggatgtgcaagctctcgtaaaacccagactgcagaagctgtctttgtt
tga |
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