KEGG   Ruditapes philippinarum (Manila clam): 132742271
Entry
132742271         CDS       T09557                                 
Name
(RefSeq) probable oligoribonuclease isoform X1
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    132742271
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rphi03019]
    132742271
   03009 Ribosome biogenesis [BR:rphi03009]
    132742271
Messenger RNA biogenesis [BR:rphi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     132742271
Ribosome biogenesis [BR:rphi03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    132742271
SSDB
Motif
Pfam: RNase_T Rv2179c-like Dicer_PBD MPM1 DUF5750 DUF4144
Other DBs
NCBI-GeneID: 132742271
NCBI-ProteinID: XP_060586609
LinkDB
Position
Unknown
AA seq 241 aa
MRIIKFVISSAFPKSNIYHHSLRGMSSASKRRKRLQRKSERIVWVDLEMSGLDVDKEHIL
EMACLVTDADLNIIAETEDLVIHQPDSVLDNMGEWCTKHHAESGLTEAVRNSKISLSDAE
KEMLDFIREHTTGKAPLAGNSIHMDKLFLAKYMPKFTDYLHYRMIDVSTIKELSRRWYTK
EFSNAPKKQLSHRALDDIKESIEELKYYRMNVFKPVVDSDEVSSGEETGESSSEEKKSKI
A
NT seq 726 nt   +upstreamnt  +downstreamnt
atgcgcattataaaatttgtaatttcaagtgcatttcctaaatcaaatatatatcatcat
tcactgcgaggaatgtcttcagcaagtaaaagacgtaaacgtttacaaaggaaaagtgaa
aggattgtttgggttgacttggagatgtctggattagatgttgataaagaacatatctta
gaaatggcatgtcttgtcacagatgctgatctgaatatcattgctgagacagaggatttg
gtgatacatcagccagatagtgtacttgacaatatgggtgaatggtgtacaaaacaccat
gcagagtctgggttaacagaagctgtgagaaatagtaagatatctttaagtgatgcagaa
aaagaaatgcttgactttattagggaacatacaacagggaaagcacctttagcaggaaac
tctatacatatggacaaattgttcctggcaaaatacatgccaaagtttacagattattta
cactatagaatgattgatgttagtacaatcaaggagttgtcaaggagatggtataccaaa
gaattttcaaatgcaccaaagaaacaattatcacacagagctttagatgacattaaagaa
agtatagaagaactaaaatattatagaatgaatgtgtttaaaccagttgtggacagcgat
gaagttagttcaggcgaagagactggggaaagttcttctgaggaaaagaagtcaaaaata
gcatag

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