Ruditapes philippinarum (Manila clam): 132742354
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Entry
132742354 CDS
T09557
Name
(RefSeq) cartilage intermediate layer protein 1-like
KO
K24436
cartilage intermediate layer protein
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rphi04990
]
132742354
Domain-containing proteins not elsewhere classified [BR:
rphi04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
132742354
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Ig_3
TSP_1
CILP
TSP1_spondin
Ig_2
CILP_C
I-set
VWA_2
ig
V-set
TSP1_ADAMTS
TSP1_CFP_C
Ig_5
DUF3914
Motif
Other DBs
NCBI-GeneID:
132742354
NCBI-ProteinID:
XP_060586710
LinkDB
All DBs
Position
Unknown
AA seq
1259 aa
AA seq
DB search
MGVKGSLAFCLCLTLFGLVYLQNDQPKMDVVLLMDSSDSHRSQNFDNEKKFALEFVRQTF
NKYAQISLYTFGSSAYSQFTLNAYNDIQLMKQAITYMWYSTGDGDVSTAVEYTIKNGFSN
SAGGRECVPKALVILTHSPIGEQEALRISTVLKTERIRCFILNMAGDSANANFITITDAS
TRTIPITDFTALESSATTITSLVKTDLPSTGCGRFSGWGNWTTCSVTCDIGLKFRSRHCI
KLEDTDKDCEGQFTEESVCIMPNCTEPVNGAWSDWVNWGTCTKTCQNGTQRRTRQCDRPQ
PRNGGKSCPGVRIQTRPCAEWKCPDCNKACPAGAHISKSCDACECSSVTLFGQIMDTTKH
AVEGAEIFLESSKYKPIAKTDRFGIFSKTGICILNENIYIQAPTCESKHFAPKELNATHW
TLINATLEKYIPPVITVQPHDKVRMVGQSLSLCCAADGKPVPSAFKWFKNGIELENLGTN
GTLKFSSVQKSDSGSYHCYTETEAGVTLSEDVQVEVHDFKEDTCGAPHSKLQELPHGCYL
TSNTSRNNTINVGDCGKALCMKSSLHDNGSCSDYWPHHCCNAKDVDVLDITCDGFSYKTT
RIKSCECKPCVFKTTVTGRAFGRQNGTDIPFRIGQVLVNGKIAATTNAAGFFKFDVPKGI
KRVVATFHDKVFKKFMDTTKIIQVKEGGETFSTIVIPLRPQPIPFHTENGTEIHLGTGPS
GMPPAGQLSIPTNAIVTPDGQPFNGTAKTILHFMDPRNRDDIESANGDFESESPGGDKVP
LKTYGMFQLSIEDDKGKELKVNKPLKFTLDASQFNIEHDENGDPDLSLWDYDNNKGVWVE
TAKMKYKQQSNTRRKLLEAVSIEAFFHPPRIPDLKFNDVHYERVWTGRYTNCDHSVKIYE
NVVRRTPKAGICYASISVYTDMNLKEAYTGGDIEIKAYVKELDNSSYIGANKATYLRNGH
TCLQVFCDKLVYIHVVRNGKERFYAANHHLPYPGYIRDTNDNEILFESRDLGRSIDCSMY
PPGTVCEGPMYQKVSGGRCNRVGINDQTFQFKFAPFTKAPEHNYVAGEGVYDKKLSWYPV
SPAKSTFRSCFMKVRVDIVDTFDIRFFAKSHLKDVNGDEFGSYSTGPTPDPRKTDLTVRG
ACIEFRCPGYIKDGNKEIFDLDTAIEVRMVTSNRNLRCKISKTNSLINITPITDATKGDI
GFTFIAKAGINYGSRYGIFISDSTPKQVEQFCDSGFDRGPNVKGLMDPTQSTAVEFDCT
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtcaaaggatctcttgcattttgcctttgtttgactctttttggattggtatat
ttgcagaatgaccaaccgaaaatggatgttgttttgctcatggattcatctgatagccat
cggtctcaaaactttgacaatgagaagaagtttgctttagaattcgtaaggcagactttt
aacaaatacgcacagatcagtctttacacattcggctccagtgcttacagtcaattcaca
ttaaacgcctataatgacattcaacttatgaagcaagcaataacgtacatgtggtacagc
acaggggatggcgatgtttctactgctgtcgaatacacaatcaagaatggcttttcaaat
tctgctggcggccgggaatgcgtcccaaaagcattagtaattctgactcactcgcctatc
ggcgaacaagaagccttaagaattagcactgtgctaaaaacagaacgaatacgatgtttt
attcttaacatggctggagactcagcgaatgcaaattttatcacaatcaccgatgcctca
acaagaacaataccaattactgatttcacagcattggagtcatctgcgaccacaataacg
agtcttgttaaaacagatctcccgagtactgggtgtggaaggttttccggttggggaaat
tggacaacatgcagtgttacatgcgatattggcttgaaattccgttcaagacactgcata
aaattggaagatacagataaagattgtgaaggacaatttacggaagagtcagtttgtatc
atgccaaactgtacagaacctgtcaatggcgcatggtctgattgggtaaattggggaacc
tgtacaaaaacttgtcagaatggaacgcaaaggcgaacaagacaatgtgaccggccacag
ccaaggaatgggggaaagagctgccctggagtacgaattcagacgagaccctgtgcagaa
tggaaatgtccagattgcaacaaggcttgcccagccggtgcacatatttctaaatcatgt
gatgcatgtgagtgctcaagtgtaacgctgtttggacaaataatggatactacgaaacat
gccgtcgaaggggcagagatatttctagagtcgagcaagtataaaccaatcgcaaaaaca
gacaggtttggaattttcagcaagacaggcatatgcattttaaacgaaaatatttacata
caagctccaacatgtgaaagtaaacattttgcaccaaaggaactgaatgctacgcattgg
acactgataaatgcgacgcttgagaaatacatacctccagttatcacggttcagccgcat
gataaagttcggatggttggacagagtttaagtctttgctgtgcagctgatgggaagcct
gtcccatctgctttcaaatggttcaaaaatggaatagaactggaaaatttaggtacaaat
ggaaccctaaaattttcatctgtacaaaagtctgacagtggatcctatcattgctatacc
gagacagaagcaggagtgactttatcggaggatgttcaagttgaagttcatgattttaag
gaagatacttgtggagccccacattcaaagttacaggagcttccacatggatgttacctt
acaagtaacactagcagaaacaacacaattaacgttggagactgtggcaaagcattatgc
atgaaatcgtctttgcatgataatggatcttgcagtgattactggccacatcactgttgt
aacgctaaagacgtagatgtccttgatattacatgcgatggatttagttacaaaactact
agaataaagtcttgtgagtgcaaaccatgcgtgtttaaaacgactgtaacaggaagagct
tttggtaggcagaatggtacagatattccttttagaattggacaagttcttgttaatggt
aaaattgcagcaacaacaaatgctgcaggattttttaaattcgatgtacctaaaggaata
aagcgtgttgtagctacttttcatgacaaagtatttaaaaaattcatggacaccacaaaa
ataatccaggttaaagaaggaggggaaacattttccacaatagttattccactacgtcca
caaccaataccgttccacactgaaaacggcactgaaatacatttagggacaggtccatct
gggatgcccccagcaggacaactgtcgattcctacaaatgctatcgtcacgccagatgga
cagccttttaatggtactgccaaaacgatactgcattttatggatccgaggaatagggat
gatattgaatctgcaaatggagactttgaaagcgaatcgcctggaggggataaagttcct
ttaaagacttatggaatgtttcagttgagtattgaagatgacaaaggaaaagaactcaaa
gtcaataaacctttgaaatttacacttgatgcaagtcaatttaatattgaacatgatgaa
aatggagatcctgatttatcattatgggattatgacaacaataaaggcgtttgggtagaa
acagccaagatgaaatataaacaacaatctaataccagaaggaagcttcttgaagctgta
agcattgaagctttcttccatccgccaaggattccagatctgaagttcaacgatgttcat
tatgaacgcgtttggacaggacggtatactaattgcgaccacagtgtcaaaatatatgag
aatgtcgtacgaaggacaccaaaagcgggaatatgttacgcaagcatatcagtttataca
gatatgaaccttaaagaagcatatactggtggggacattgaaattaaagcatatgtcaaa
gagttagacaactcctcatatattggtgcaaataaagcgacatatttgagaaatgggcac
acttgccttcaagtgttttgcgataaattggtatatatacatgttgtaagaaatggtaaa
gaaagattttatgccgccaatcaccacctaccatacccgggatatataagagacacaaat
gacaatgaaatactttttgagtcaagagatttagggagatcaatagattgcagtatgtac
ccacctggtacagtgtgtgaaggtccgatgtatcaaaaggtcagtggaggaagatgtaac
agagtaggcataaatgatcagacgttccaatttaagtttgcaccattcacaaaagcccca
gagcataattatgttgccggtgaaggcgtatatgataagaaactttcttggtaccctgtt
tcacctgcgaaatcaacatttaggtcttgtttcatgaaagtacgagttgatatagttgat
acatttgatatacgattttttgcaaagagtcatttaaaagacgtcaacggggatgaattt
ggatcatactctacagggccaactcctgatcctagaaaaacggatctgactgtaagggga
gcttgtatcgaattccgatgcccgggatacatcaaagacggcaataaagaaatatttgac
ctggatacagcaatagaagttcgtatggtaacttcaaatcgaaacttgcgatgtaaaatc
agtaagacgaattcgttgataaacataacgcctatcacagatgcaacaaaaggagacatt
ggcttcacatttattgcaaaggcagggataaattatggatccagatatggtattttcatt
agcgacagtaccccaaaacaagttgaacaattctgtgatagtggatttgatcgtggtcca
aatgtaaagggcttaatggatccgacacaaagcacagctgttgaatttgactgcacataa
DBGET
integrated database retrieval system
